| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4714013 | 52 (0.710) | 4 (0.060) | 4/236 | NT | 7.5% | coding (85/891 nt) | PP_4172 | hypothetical protein |
| ? | NC_002947 | = 4714018 | 49 (0.710) | coding (90/891 nt) | PP_4172 | hypothetical protein | |||||
CCACCTCGGCCCTGCAGAACCGCTACGACAGCCGTCACCGCCTGAGCGTGAGCGCGGAGCTGGAGTTCTGATGGCCCTGCTGCTGCGCCTGTTGCTGCTCTGCCTGTGGCCGTTGGGGCCTTTGTCCGCCAGCGAAGTCCTGCTGGTGGGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4713859‑4714013‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctg‑GTCCTCAGCCCCCACCAGCAGGACTTCGCTGGCGGACAAAGGCCCCAACGGCCACAGGCAGAGCAGCAACAGGCGCAGCAGCAGGGCCATCAGAACTCCAGCTCCGCGCTCACGCTCAGGCGGTGACGGCTGTCGTAGCGGTTCTGCAG < NC_002947/4714018‑4713870 CCACCTCGGCCCTGCAGAACCGCTACGACAGCCGTCACCGCCTGAGCGTGAGCGCGGAGCTGGAGTTCTGATGGCCCTGCTGCTGCGCCTGTTGCTGCTCTGCCTGTGGCCGTTGGGGCCTTTGTCCGCCAGCGAAGTCCTGCTGGTGGG < 1:1579736/150‑1CCACCTCGGCCCTGCAGAACCGCTACGACAGCCGTCACCGCCTGAGCGTGAGCGCGGAGCTGGAGTTCTGATGGCCCTGCTGCTGCGCCTGTTGCTGCTCTGCCTGTGGCCGTTGGGGCCTTTGTCCGCCAGCGAAGTCCTGCTGGTGGG > 2:934202/1‑150CCACCTCGGCCCTGCAGAACCGCTACGACAGCCGTCACCGCCTGAGCGTGAGCGCGGAGCTGGAGTTCTGATGGCCCTGCTGCTGCGCCTGTTGATGATCTGCCTGTGGCCGCTGGGGCCAGGTGCCGCCAGCGAAGGCCTGCTGGTGGG > 2:1181823/1‑150 ACCTCGGCCCTGCAGAACCGCTACGACAGCCGTCACCGCCTGAGCGTGAGCGCGGAGCTGGAGTTCTGATGGCCCTGCTGCTGCGCCTGTTGCTGCTCTGCCTGTGGCCGTTGGGGCCTTTGTCCGCCAGCGAAGTCCTGCTGGTGGGGG < 1:934202/150‑1 gaaggcgCTGCAGAACCGCTACGACAGCCGTCACCGCCTGAGCGTGAGCGCGGAGCTGGAGTTCTGATGGCCCTGCTGCTGCGCCTGTTGCTGCTCTGCCTGTGGCCGTTGGGGCCTTTGTCCGCCAGCGAAGTCCTGCTGGTGGGGGCT > 2:867583/8‑150 CGGCCCTGCAGAACCGCTACGACAGCCGTCACCGCCTGAGCGTGAGCGCGGAGCTGGAGTTCTGATGGCCCTGCTGCTGCGCCTGTTGCTGCTCTGCCTGTGGCCGTTGGGGCCTTTGTCCGCCAGCGACGTCCTGCTGGTGTTGGCTta < 2:1392861/150‑3 GTGAGCGCGGAGCTGGAGTTCTGATGGCCCTGCTGCTGCGCCTGTTGCTGCTCTGCCTGTGGCCGTTGGGGCCTTTGTCCGCCAGCGAAGTCCTGCTGGTGGG < 1:1636172/103‑1 GTGAGCGCGGAGCTGGAGTTCTGATGGCCCTGCTGCTGCGCCTGTTGCTGCTCTGCCTGTGGCCGTTGGGGCCTTTGTCCGCCAGCGAAGTCCTGCTGGTGGG > 2:1636172/1‑103 TGCCTGTGGCCGTTGGGGCCTTTGTCCGCCAGCGAAGTCCTGCTGGTGGGGGCTG‑GTCCTCAGCCCCCA > 1:1660009/1‑69 TGCCTGTGGCCGTTGGGGCCTTTGTCCGCCAGCGAAGTCCTGCTGGTGGGGGCTG‑GTCCTCAGCCCCCA < 2:1660009/69‑1 GTCCTGCTGGTGGGGGCTGAGGAC‑CAGCCCCCACCAGCAGGACTTCGCTGGCGGACAAAGGCCCCAACGGCCACAGGCAGAGCAGCAACAGGCGCAGCAGCAGGGCCATCAGAACTCCA < 1:1313921/119‑1 GTCCTGCTGGTGGGGGCTGAGGAC‑CAGCCCCCACCAGCAGGACTTCGCTGGCGGACAAAGGCCCCAACGGCCACAGGCAGAGCAGCAACAGGCGCAGCAGCAGGGCCATCAGAACTCCA > 2:1313921/1‑119 GCTG‑GTCCTCAGCCCCCACCAGCAGGACTTCGCTGGCGGACAAAGGCCCCAACGGCCACAGGCAGAGCAGCAACAGGCGCAGCAGCAGGGCCATCAGAACTCCAGCTCCGCGCTCACGCTCAGGCGGTGACGGCTGTCGTAGCGGTTCTG > 1:1181823/1‑150 G‑GTCCTCAGCCCCCACCAGCAGGACTTCGCTGGCGGACAAAGGCCCCAACGGCCACAGGCAGAGCAGCAACAGGCGCAGCAGCAGGGCCATCAGAACTCCAGCTCCGCGCTCACGCTCAGGCGGTGACGGCTGTCGTAGCGGTTCTGCAG < 2:1831014/150‑1 CCACCTCGGCCCTGCAGAACCGCTACGACAGCCGTCACCGCCTGAGCGTGAGCGCGGAGCTGGAGTTCTGATGGCCCTGCTGCTGCGCCTGTTGCTGCTCTGCCTGTGGCCGTTGGGGCCTTTGTCCGCCAGCGAAGTCCTGCTGGTGGGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4713859‑4714013‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggctg‑GTCCTCAGCCCCCACCAGCAGGACTTCGCTGGCGGACAAAGGCCCCAACGGCCACAGGCAGAGCAGCAACAGGCGCAGCAGCAGGGCCATCAGAACTCCAGCTCCGCGCTCACGCTCAGGCGGTGACGGCTGTCGTAGCGGTTCTGCAG < NC_002947/4714018‑4713870 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |