New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4714580 =	84 (1.150)	5 (0.070)	5/240	NT	6.0%	coding (652/891 nt)	PP_4172	hypothetical protein
	?	NC_002947	4714619 =	75 (1.060)					coding (691/891 nt)	PP_4172	hypothetical protein

TGCCACTGACGCCGTAACGCACCGGGTACAGGCTGCGCGGCCAGCGCGTCGGCGGCTGGTCGAGCAACTGGTCGAGCACCCACAGCCAGTCGTCCTGGTCGCTGTAGGTACTGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGCGTTCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4714730‑4714580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCT‑GGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGTGGCAACCAGCAGGTGGCCCGTGCCCTGGGTCTTGAACCAAT  >  NC_002947/4714619‑4714767                                                                                                                                                                                                                                                                                                                TGCCACTGACGCCGTAACGCACCGGGTACAGGCTGCGCGGCCAGCGCGTCGGCGGCTGGTCGAGCAACTGGTCGAGCACCCACAGCCAGTCGTCCTGGTCGCTGTAGGTACTGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGCGTTCGGGC                                                                                                                                                         <  1:1413308/150‑1       TGACGCCGTAACGCACCGGGTACAGGCTGCGCGGCCAGCGCGTCGGCGGCTGGTCGAGCAACTGGTCGAGCACCCACAGCCAGTCGTCCTGGTCGCTGTAGGTACTGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGCGTTCGGGCCAGTAC                                                                                                                                                   <  2:975398/150‑1                                   GCGCGGCCAGCGCGTCGGCGGCTGGTCGAGCAACTGGTCGAGCACCCACAGCCAGTCGTCCTGGTCGCTGTAGGTACTGGCCCGAACGCCGGCTTCGTTCG‑CGCCGGCGCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGG                                                                                                                       <  2:221333/150‑1                                                                                                    CGCTGTAGGTACTGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGCGTTCGGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCT‑GGCCGCGCAGCCTGTACCCGGTGCGTTA                                                     <  1:221333/150‑1                                                                                                            GTACTGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGCGTTCGGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCT‑GGCCGCGCAGCCTGTACCCGGTGC                                                         >  1:1429995/1‑138                                                                                                            GTACTGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGCGTTCGGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCT‑GGCCGCGCAGCCTGTACCCGGTGC                                                         <  2:1429995/138‑1                                                                                                              ACTGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGCGCCCTGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCT‑GGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGT                                           >  2:321368/1‑150                                                                                                                                                 ccCGGGCCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCGCGACCGGCC‑ACGGCGACCTGGGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGTGGCAACCAGCAGGTGGCCCGTGCCCTGGGTCTTG         <  2:1611265/148‑1                                                                                                                                                       CCAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCT‑GGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGTGGCAACCAGCAGGTGGCCCGTGCCCTGGGTCTTGAACCAA   <  1:798456/150‑1                                                                                                                                                        CAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCT‑GGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGTGGCAACCAGCAGGTGGCCCGTGCCCTGGGTCTTGAACCAAT  <  1:639221/150‑1                                                                                                                                                                                                                                                                                                                TGCCACTGACGCCGTAACGCACCGGGTACAGGCTGCGCGGCCAGCGCGTCGGCGGCTGGTCGAGCAACTGGTCGAGCACCCACAGCCAGTCGTCCTGGTCGCTGTAGGTACTGGCCAGGGCGCCGGC‑GCGAACGAAGCCGGCGTTCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4714730‑4714580 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGTACCTACAGCGACCAGGACGACTGGCTGTGGGTGCTCGACCAGTTGCTCGACCAGCCGCCGACGCGCT‑GGCCGCGCAGCCTGTACCCGGTGCGTTACGGCGTCAGTGGCAACCAGCAGGTGGCCCGTGCCCTGGGTCTTGAACCAAT  >  NC_002947/4714619‑4714767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.