New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 475781665 (0.890)4 (0.060) 4/238 NT 6.0% coding (1044/1413 nt) ompQ outer membrane pyoverdine efflux protein
?NC_002947 = 4757858 63 (0.900)coding (1086/1413 nt) ompQ outer membrane pyoverdine efflux protein

GGCCGCGGCCAGCGCCAATGTGCAGGTCGCCAGGGCAGCCCTGCTGCCCAAACTCACGCTGGGCGTGGAATTCGGCAGCGGCGCCAGCACCTTCGCGCAGATTTTCGACAGCCCCTACTACACCCTGACCAGTGGCCTGGTCGCCCCGGTGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4757663‑4757816
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttcGGCCTCGGCCAGTTGCTGCGCGGCGCGCAGACGGCCTCGGTTGAACACCGGGGCGACCAGGCCACTGGTCAGGGTGTAGTAGGGGCTGTCGAAAATCTGCGCGAAGGTGCTGGCGCCGCTGCCGAATTCCACGCCCAGCGTGAGTTTGG  <  NC_002947/4757858‑4757710
                                                                                                                                                                                                                                                                                                               
GGCCGCGGCCAGCGCCAATGTGCAGGTCGCCAGGGCAGCCCTGCTGCCCAAACTCACGCTGGGCGTGGAATTCGGCAGCGGCGCCAGCACCTTCGCGCAGATTTTCGACAGCCCCTACTACACCCTGACCAGTGGCCTGGTCGCCCCGGT                                                                                                                                                           <  1:1425253/150‑1
 GCCGCGGCCAGCGCCAATGTGCAGGTCGCCAGGGCAGCCCTGCTGCCCAAACTCACGCTGGGCGTGGAATTCGGCAGCGGCGCCAGCACCTTCGCGCAGATTTTCGACAGCCCCTACTACACCCTGACCAGTGGCCTGGTCGCCCCGGTG                                                                                                                                                          <  1:719912/150‑1
    GCGGCCAGCGCCAATGTGCAGGTCGCCAGGGCAGCCCTGCTGCCCAAACTCACGCTGGGCGTGGAATTCGGCAGCGGCGCCAGCACCTTCGCGCAGATTTTCGACAGCCCCTACTACACCCTGACCAGTGGCCTGGTCGCCCCGGTGTTC                                                                                                                                                       >  1:1828332/1‑150
    GCGGCCAGCGCCAATGTGCAGGTCGCCAGGGCAGCCCTGCTGCCCAAACTCACGCTGGGCGTGGAATTCGGCAGCGGCGCCAGCACCTTCGCGCAGATTTTCGACAGCCCCTACTACACCCTGACCAGTGGCCTGGTCGCCCCGGTGTTC                                                                                                                                                       <  2:1625694/150‑1
                                       CCTGCTGCCCAAACTCACGCTGGGCGTGGAATTCGGCAGCGGCGCCAGCACCTTCGCGCAGATTTTCGACAGCCCCTACTACACCCTGACCAGTGGCCTGGTCGCCCCGGTGTTCGGCCTCGGCCAGTTGCTGCGCGGCGCGCAGACGGC                                                                                                                    >  1:1513244/1‑150
                                                       ACGCTGGGCGTGGAATTCGGCAGCGGCGCCAGCACCTTCGCGCAGATTTTCGACAGCCCCTACTACACCCTGACCAGTGGCCTGGTCGCCCCGGTGTTCGGCCTCGGCCAGTTGCTGCGCGGCGCGCAGACGGCCTCGGTTGAACACCGG                                                                                                    <  2:1513244/150‑1
                                                                          GCAGCGGCGCCAGCACCTTCGCGCAGATTTTCGACAGCCCCTACTACACCCTGACCAGTGGCCTGGTCGCCCCGGTGTTCGGCCTCGGCCAGTTGCTGCGCGGCGCGCAGACGGCCTCGGTTGAACACC                                                                                                      <  1:1374126/129‑1
                                                                          GCAGCGGCGCCAGCACCTTCGCGCAGATTTTCGACAGCCCCTACTACACCCTGACCAGTGGCCTGGTCGCCCCGGTGTTCGGCCTCGGCCAGTTGCTGCGCGGCGCGCAGACGGCCTCGGTTGAACACC                                                                                                      >  2:1374126/1‑129
                                                                                                                                                     TGTTCGGCCTCGGCCAGTTGCTGCGCGGCGCGCAGACGGCCTCGGTTGAACACCGGGGCGACCAGGCCACTGGTCAGGGTGTAGTAGGGGCTGTCGAAAATCTGCGCGAAGGTGCTGGCGCCGCTGCCGAATTCCACGCCCAGCGTGAGT      >  1:388741/1‑150
                                                                                                                                                      GTTCGGCCTCGGCCAGTTGCTTCGCGGCGCGCAGACGGCCTCGGTTGAACACCGGGGCGACCAGGCCACTGGTCAGGGTGTAGTAGGGG                                                                  >  1:551469/1‑89
                                                                                                                                                      GTTCGGCCTCGGCCAGTTGCTTCGCGGCGCGCAGACGGCCTCGGTTGAACACCGGGGCGACCAGGCCACTGGTCAGGGTGTAGTAGGGG                                                                  <  2:551469/89‑1
                                                                                                                                                      GTTCGGCCTCGGCCAGTTGCTGCGCGGCGCGCAGACGGCCTCGGTTGAACACCGGGGCGACCAGGCCACTGGTCAGGGTGTAGTAGGGGCTGTCGAAAATCTGCGCGAAGGTGCTGGCGCCGCTGCCGAATTCCACGCCCAGCGTGAGTT     <  2:866397/150‑1
                                                                                                                                                       TTCGGCCTCGGCCAGTTGCTGCGCGGCGCGCAGACGGCCTCGGTTGAACACCGGGGCGACCAGGCCACTGGTCAGGGTGTAGTAGGGGCTGTCGAAAATCTGCGCGAAGGTGCTGGCGCCGCTGCCGAATTCCACGCCCAGCGTGAGTTT    >  1:815176/1‑150
                                                                                                                                                       TTCGGCCTCGGCCAGTTGCTGCGCGGCGCGCAGACGGCCTCGGTTGAACACCGGGGCGACCAGGCCACTG                                                                                    >  1:1051936/1‑70
                                                                                                                                                       TTCGGCCTCGGCCAGTTGCTGCGCGGCGCGCAGACGGCCTCGGTTGAACACCGGGGCGACCAGGCCACTG                                                                                    <  2:1051936/70‑1
                                                                                                                                                         CGGCCTCGGCCAGTTGCTGCGCGGCGCGCAGACGGCCTCGGTTGAACACCGGGGCGACCAGGCCACTGGTCAGGGTGTAGTAGGGGCTGTCGAAAATCTGCGCGAAGGTGCTGGCGCCGCTGCCGAATTCCACGCCCAGCGTGAGTTTGG  <  1:1084430/150‑1
                                                                                                                                                                                                                                                                                                               
GGCCGCGGCCAGCGCCAATGTGCAGGTCGCCAGGGCAGCCCTGCTGCCCAAACTCACGCTGGGCGTGGAATTCGGCAGCGGCGCCAGCACCTTCGCGCAGATTTTCGACAGCCCCTACTACACCCTGACCAGTGGCCTGGTCGCCCCGGTGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4757663‑4757816
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttcGGCCTCGGCCAGTTGCTGCGCGGCGCGCAGACGGCCTCGGTTGAACACCGGGGCGACCAGGCCACTGGTCAGGGTGTAGTAGGGGCTGTCGAAAATCTGCGCGAAGGTGCTGGCGCCGCTGCCGAATTCCACGCCCAGCGTGAGTTTGG  <  NC_002947/4757858‑4757710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.