| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4770306 | 50 (0.680) | 4 (0.060) | 4/238 | NT | 7.0% | coding (9006/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
| ? | NC_002947 | = 4770329 | 58 (0.830) | coding (8983/10413 nt) | pvdD | non‑ribosomal peptide synthetase | |||||
GGGCCGTCGCGCACCACCACCGCCGCCTGGCGTACCGGGTCCATGTCGGCCAGGCGCGCCTCGATTTCGCCCAGTTCGATGCGGAAACCGCGAACCTTGACCTGATTGTCCAGGCGCCCGAGGTAATCGAAGGTGCCGTCCTCCCGCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4770154‑4770306‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCTGTACCGTACCGGTGACCTGGTGCGCCAGCGGGAGGACGGCACCTTCGATTACCTCGGGCGCCTGGACAATCAGGTCAAGGTTCGCGGTTTCCGCATCGAACTGGGCGAAATCGAGGCGCGCCTGGCCGACATGGACCCGGTACGCCA < NC_002947/4770329‑4770181 GGGCCTTCGCGCACCACCCCCGCCGCCTGGCGTACCGGGTCCATGTCGGCCAGGCGCGCCTCGATTTCGCCCAGTTCGATGCGGAAACCTCCAACCTTGACCGGATTGTCCAGGCGCCCGAGGTAATCGACGGTCCCTTCCTCCCGCTGt < 2:963769/150‑2GGGCCGTCGCGCACCACCACCGCCGCCTGGCGTACCGGGTCCATGTCGGCCAGGCGCGCCTCGATTTCGCCCAGTTCGATGCGGAAACCGCGAACCTTGACCTGATTGTCCAGGCGCCCGAGGTAATCGAAGGTGCCGTCCTCCCGCTGG > 2:1550170/1‑150 GCCGTCGCTCACCACCACCGCCGCCGGGCGTACCGGGTCCATCGCGGCCAGGCGCCCCTCTATTTCGCCCAGTTCGATGAGGAAACCGCGAACCTTGTCCTGATTGTCCAGGCGCCCGAGGTAATCGAAGGTGCCGTGCTCCCGCTGGCG > 1:887822/1‑150 GCCGTCGCGCACCACCACCGCCGCCTGGCGTACCGGGTCCATGTCGGCCAGGCGCGCCTCGATTTCGCCCAGTTCGATGCGGAAACCGCGAACCTTGACCTGATTGTCCAGGCGCCCGAGGTAATCGAAGGTGCCGTCCTCCCGCTGGCG > 2:629685/1‑150 TCGGCCAGGCGCGCCTCGATTTCGCCCAGTTCGATGCGGAAACAGCGAACCTTGACCTGATTGTCCAGGCGCCCGAGGTAATCGAAGGTGCCGTCCTCCCGCTGGCGCCTGTACCGTACCGGTGACCTGGTGCGCCAGCGG < 1:886684/141‑1 TCGGCCAGGCGCGCCTCGATTTCGCCCAGTTCGATGCGGAAACAGCGAACCTTGACCTGATTGTCCAGGCGCCCGAGGTAATCGAAGGTGCCGTCCTCCCGCTGGCGCCTGTACCGTACCGGTGACCTGGTGCGCCAGCGG > 2:886684/1‑141 CCTTGACCTGATTGTCCAGGCGCCCGAGGTAATCGAAGGTGCCGTCCTCCCGCTGGCGCCTGTACCGTACCGGTGACCTGGTGCGCCAGCGGGAG > 1:1884990/1‑95 CCTTGACCTGATTGTCCAGGCGCCCGAGGTAATCGAAGGTGCCGTCCTCCCGCTGGCGCCTGTACCGTACCGGTGACCTGGTGCGCCAGCGGGAG < 2:1884990/95‑1 GCGCCTGTACCGTACCGGTGACCTGGTGCGCCAGCGGGAGGACGGCACCTTCGATTACCTCGGGCGCCTGGACAATCAGGTCAAGGTTCGCGGTTTCCGCATCGAACTGGGCGAAATCGAGGCGCGCCTGGCCGACATGGACCCGGTACG > 1:313284/1‑150 GCCTGTACCGTACCGGTGACCTGGTGCGCCAGCGGGAGGACGGCACCTTCGATTACCTCGGGCGCCTGGACAATCAGGTCAAGGTTCGCGGTTTCCGCATCGAACTGGGCGAAATCGAGGCGCGCCTGGCCGACATGGACCCGGTACGCC < 1:1647468/150‑1 GCCTGTACCGTACCGGTGACCTGGTGCGCCAGCGGGAGGACGGCACCTTCGATTACCTCGGGCGCCTGGACAATCAGGTCAAGGTTCGCGGTTTCCGCATCGAACTGGGCGAAATCGAGGCGCGCCTGGCCGACATGGACCCGGTACGCC > 2:421569/1‑150 CCTGTACCGTACCGGTGACCTGGTGCGCCAGCGGGAGGACGGCACCTTCGATTACCTCGGGCGCCTGGACAATCAGGTCAAGGTTCGCGGTTTCCGCATCGAACTGGGCGAAATCGAGGCGCGCCTGGCCGACATGGACCCGGTACGCCA < 1:421569/150‑1 GGGCCGTCGCGCACCACCACCGCCGCCTGGCGTACCGGGTCCATGTCGGCCAGGCGCGCCTCGATTTCGCCCAGTTCGATGCGGAAACCGCGAACCTTGACCTGATTGTCCAGGCGCCCGAGGTAATCGAAGGTGCCGTCCTCCCGCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4770154‑4770306‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCTGTACCGTACCGGTGACCTGGTGCGCCAGCGGGAGGACGGCACCTTCGATTACCTCGGGCGCCTGGACAATCAGGTCAAGGTTCGCGGTTTCCGCATCGAACTGGGCGAAATCGAGGCGCGCCTGGCCGACATGGACCCGGTACGCCA < NC_002947/4770329‑4770181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |