New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4785813 | 60 (0.820) | 4 (0.060) | 4/242 | NT | 6.0% | coding (1546/7887 nt) | pvdJ | non‑ribosomal peptide synthetase |
? | NC_002947 | = 4785843 | 67 (0.940) | coding (1516/7887 nt) | pvdJ | non‑ribosomal peptide synthetase |
AGCAGGCCGGTCACCCATTCGATGGAGCGCTCTTGGCACAAGGCAACCACTGCGCCCGGCTTGACGCCCATTGCCAGCAGGTGGTGCGCCAACTGGTTCGAACGCTGATCGAGCTGGGCATAGCTCAACTGCTCTGCGCCCGCACGCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4785662‑4785813 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcCGGGCGCTGGCCAATGCCGGCGAGCGCCCCGCGCTGCGTGCGGGCGCAGAGCAGTTGAGCTATGCCCAGCTCGATCAGCGTTCGAACCAGTTGGCGCACCACCTGCTGGCAATGGGCGTCAAGCCGGGCGCAGTGGTTGCCTTGT < NC_002947/4785843‑4785699 AGCAGGCCGGTCACCCATTCGATGGAGCGCTCTTGGCACAAGTCAACCACTGCGCCCGGCTTGACGCCCATTGCCAGCAGGTGGTGCGCCAACTGGTTCGAACGCTGATCGAGCTGGGCATAGCTCAACTGCTCTGCGCCCGCACGCAGC < 2:527146/150‑1 GCAGGCCGGTCACCCATTCGATGGAGCGCTCTTGGCACAAGGCAACCACTGCGCCCGGCTTGACGCCCATTGCCAGCAGGTGGTGCGCCAACTGGTTCGAACGCTGATCGAGCTGGGCATAGCTCAACTGCTCTGCGCCCGCACGCAGCG > 1:1400982/1‑150 GGCACAAGGCAACCACTGCGCCCGGCTTGACGCCCATTGCCAGCAGGTGGTGCGCCAACTGGTTCGAACGCTGATCGAGCTGGGCATAGCTCAACTGCTCTGCGCCCGCACGCAGCGCCGGGCGCTGGCCAATGCCGGCGAGCGCCCCGC < 2:918014/150‑1 CGCCCGGCTTGACGCCCATTGCCAGCAGGTGGTGCGCCAACTGGTTCGAACGCCGATCGAGCGGCCCATACCTCAACTGCTCTGCGCCCGCACGCAGCGCCGGGCGCTGGCCAATGCCGGCGAGCGCCCCGCGCTGCGTGCGGGCGCAGA < 1:34206/150‑1 ATAGCTCAACTGCTCTGCGCCCGCACGCAGCGCCGGGCGCTGGCCAATGCCGGCGAGCGCCCCGCGCTGCGT < 1:1795665/72‑1 ATAGCTCAACTGCTCTGCGCCCGCACGCAGCGCCGGGCGCTGGCCAATGCCGGCGAGCGCCCCGCGCTGCGT > 2:1795665/1‑72 GCCGGGCGCTGGCCAATGCCGGCGAGCGCCCCGCGCTGCGTGCGGGCGCAGAGCAGTTGAGCTATGCCCAGCTCGATCAGCGTTCGAACCAGTTGGCGCACCACCTGCTGGCAATGGGCGTCAAGCCGGGCGCAGTGGTTGCCTTGT < 1:1796815/147‑1 GCCGGGCGCTGGCCAATGCCGGCGAGCGCCCCGCGCTGCGTGCGGGCGCAGAGCAGTTGAGCTATGCCCAGCTCGATCAGCGTTCGAACCAGTTGGCGCACCACCTGCTGGCAATGGGCGTCAAGCCGGGCGCAGTGGTTGCCTTGT > 2:1796815/1‑147 AGCAGGCCGGTCACCCATTCGATGGAGCGCTCTTGGCACAAGGCAACCACTGCGCCCGGCTTGACGCCCATTGCCAGCAGGTGGTGCGCCAACTGGTTCGAACGCTGATCGAGCTGGGCATAGCTCAACTGCTCTGCGCCCGCACGCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4785662‑4785813 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcCGGGCGCTGGCCAATGCCGGCGAGCGCCCCGCGCTGCGTGCGGGCGCAGAGCAGTTGAGCTATGCCCAGCTCGATCAGCGTTCGAACCAGTTGGCGCACCACCTGCTGGCAATGGGCGTCAAGCCGGGCGCAGTGGTTGCCTTGT < NC_002947/4785843‑4785699 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |