New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4787419 = | 110 (1.510) | 6 (0.090) | 6/236 | NT | 5.4% | coding (6466/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
? | NC_002947 | 4787458 = | 105 (1.510) | coding (6427/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
TTCTTTGAACTGGGTGGTCACTCGCTGCTGGCGGCCCAGGCCCTCTCACGTATCAACAGCCAACTGGGCATCGATATGCCGATCCGTCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4787569‑4787419 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcccGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAGGAC > NC_002947/4787458‑4787605 TTCTTTGAACTGGGTGGTCACTCGCTGCTGGCGGCCCAGGCCCTCTCACGTATCAACAGCCAACTGGGCATCGATATGCCGATCCGTCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCC > 2:351343/1‑150 CATCGATATGCCGATCCGTCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCC > 1:83582/1‑83 CATCGATATGCCGATCCGTCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCC < 2:83582/83‑1 GATATGCCGATCCGTCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAG > 1:1161781/1‑75 GATATGCCGATCCGTCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAG < 2:1161781/75‑1 CGTCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGA > 1:1039317/1‑136 CGTCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGA < 2:1039317/136‑1 TCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTG > 1:96984/1‑121 TCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTG < 2:96984/121‑1 GTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGC < 1:1811833/135‑1 GTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGC > 2:1811833/1‑135 GCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAGG < 2:1631831/150‑1 GCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGA > 1:1399416/1‑95 GCCCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGA < 2:1399416/95‑1 CCGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCACAGTTGGCTGTTGATACGAGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAGGAC > 2:469040/1‑150 TTCTTTGAACTGGGTGGTCACTCGCTGCTGGCGGCCCAGGCCCTCTCACGTATCAACAGCCAACTGGGCATCGATATGCCGATCCGTCTCATCTTCGAAACACCGGTTCTGCGGGCCTTTGCCCAGGCGCTGGAAGGCGCGGGCCAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4787569‑4787419 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcccGCAGAACCGGTGTTTCGAAGATGAGACGGATCGGCATATCGATGCCCAGTTGGCTGTTGATACGTGAGAGGGCCTGGGCCGCCAGCAGCGAGTGACCACCCAGTTCAAAGAAGTTGTCGTCCAGCCCGACCTGCTCGATGCGCAGGAC > NC_002947/4787458‑4787605 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |