| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4789078 | 97 (1.330) | 6 (0.090) | 6/238 | NT | 5.9% | coding (4807/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
| ? | NC_002947 | = 4789101 | 99 (1.410) | coding (4784/6525 nt) | pvdI | non‑ribosomal peptide synthetase | |||||
TCCTCGATCATGTAGGCCAGGCGTTCGGCCGGGTAGTCAGGGTCCAGCGGCACATAGGCAGCGCCCACCTTGAGGATCGCCAGCAAGCCCGCGACCATCCCCAGGCCACGCTCCAGGGCCACACCGATCAGCACCTCAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4788936‑4789078‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCGGTGTGGCCCTGGAGCGTGGCCTGGGGATGGTCGCGGGCTTGCTGGCGATCCTCAAGGTGGGCGCTGCCTATGTGCCGCTGGACCCTGACTACCCGGCCGAACGCCT < NC_002947/4789101‑4788954 TCCTCGATCATGTAGGCCAGGCGTTCGGCCGGGTAGTCAGGGTCCAGCGGCACATAGGCAGCGCCCACCTTGAGGATCGCCAGCAAGCCCGCGACCATCCCCAGGCCACGCTCCAGGGCCACACCGATCAGCACCTCAG < 1:1044601/139‑1TCCTCGATCATGTAGGCCAGGCGTTCGGCCGGGTAGTCAGGGTCCAGCGGCACATAGGCAGCGCCCACCTTGAGGATCGCCAGCAAGCCCGCGACCATCCCCAGGCCACGCTCCAGGGCCACACCGATCAGCACCTCAG > 2:1044601/1‑139 TCGATCATGTAGGCCAGGCGTTCGGCCGGGTAGTCAGGGTCCAGCGGCACATAGGCAGCGCCCACCTTGAGGATCGCCAGCAAGCCCGCGACCATCCCCAGGCCACGCTCCAGGGCCACACCGATCAGCACCTCAGGCCCATCGCCTGCA > 2:591072/1‑150 GCGTTCGGCCGGGTAGTCAGGGTCCAGCGGCACATAGGCAGCGCCCACCTTGAGGATCGCCAGCAAGCCCGCGACCATCCCCAGGCCACGCTCCAGGGCCACACCGATCAGCACCTCAGGCCCATCGCCTGCAAGCGCTCGGCGCCGGGC < 1:591072/150‑1 TCAGGGTCCAGCGGCACATAGGCAGCGCCCACCTTGAGGATCGCCAGCAAGCCCGCGACCATCCCCAGGCCACGCTCCAGGGCCACACCGATCAGCACCTCAGGCCCATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTG > 1:1723171/1‑142 TCAGGGTCCAGCGGCACATAGGCAGCGCCCACCTTGAGGATCGCCAGCAAGCCCGCGACCATCCCCAGGCCACGCTCCAGGGCCACACCGATCAGCACCTCAGGCCCATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTG < 2:1723171/142‑1 AGGATCGCCAGCAAGCCCGCGACCATCCCCAGGCCACGCTCCAGGGCCACACCGATCAGCACCTCAGGCCCATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCG < 1:633406/113‑1 AGGATCGCCAGCAAGCCCGCGACCATCCCCAGGCCACGCTCCAGGGCCACACCGATCAGCACCTCAGGCCCATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCG > 2:633406/1‑113 GCGACCATCCCCAGGCCACGCTCCAGGGCCACACCGATCAGCACCTCAGGC < 1:835779/51‑1 GCGACCATCCCCAGGCCACGCTCCAGGGCCACACCGATCAGCACCTCAGGC > 2:835779/1‑51 CCATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCGGTGTGGCCCTGGAGCGTGGCCTGGGGATGGTCGCGGGCTTGCTGGCGATCCTCAAGGTGGGCGCTGCCTATGTGCCGCTGGACCCTGACTACCCGGTCGAACGCCT > 1:1563915/1‑150 TCCTCGATCATGTAGGCCAGGCGTTCGGCCGGGTAGTCAGGGTCCAGCGGCACATAGGCAGCGCCCACCTTGAGGATCGCCAGCAAGCCCGCGACCATCCCCAGGCCACGCTCCAGGGCCACACCGATCAGCACCTCAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4788936‑4789078‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccATCGCCTGCAAGCGCTCGGCGCCGGGCCTGAGGTGCTGATCGGTGTGGCCCTGGAGCGTGGCCTGGGGATGGTCGCGGGCTTGCTGGCGATCCTCAAGGTGGGCGCTGCCTATGTGCCGCTGGACCCTGACTACCCGGCCGAACGCCT < NC_002947/4789101‑4788954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |