New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4826126 | 70 (0.960) | 8 (0.110) | 7/242 | NT | 9.8% | coding (5109/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | = 4826147 | 79 (1.110) | coding (5088/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
CAGGGTGCCGCGCAGGCGTGCCATGCCGCCGACGTTGTACGCCGGGCTGTCCGGCTCCATCTGCCAGAGGAACCACATTCGCTGCTGCGAGTACGACAGCGGCACTGCCTGACGGCGGTCGACACGGGTGATTGCACCTTGCAGGTTG‑‑‑‑CGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4825976‑4826126 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcCCGCCTGCGCGCG‑GCCGGCGAGCGCAACCTGCAAGGTGCAATCACCCGTGTCGACCGCCGTCAGGCAGTGCCGCTGTCGTACTCGCAGCAGCGAATGTGGTTCCTCTGGCAGATGGAGCCGGACAGCCCGGCGTACAACGTCGGCGGCA < NC_002947/4826147‑4825999 CAGGGTGCCGCGCAGGCGTGCCATGCCGCCGACGTTGTACGCCGGGCTGTCCGGCTCCATCTGCCAGAGGAACCACATTCGCTGCTGCGAGTACGACAGCGGCACTGCCTGACGGCGGTCGACACGGGTGATTGCACCTTGCAGGTTG‑‑‑‑CG > 2:1931064/1‑150 GCCGCCGACGTTGTACACCGGGCTGTCCGGCTCCATCTGCCAGAGGAACCACATTCGCGGCTGCGAGTACGACAGGGGCACTGCCTGACGGCGGTCGACACGGGTGATTGCACCTTGCAGGTTG‑‑‑‑CGCTCGCCTGCGCGCG‑GCCGGCGAGC < 2:157003/150‑1 CGCCGACGTTGTACGCCGGGCTGTCCGGCTCCATCTGCCAGAGGAACCACATTCGCTGCTGCGAGTACGACAGCGGCACTGCCTGACGGCGGTCGACACGGGTGATTGCACCTTGCAGGTTGCGCTCGCCCGCCTGCGCGCG‑GCCGGCGA < 1:571165/150‑1 GACAGCGGCACTGCCTGACGGCGGTCGACACGGGTGATTGCACCTTGCAGGTTGCGCTCGCCCGCCTGCGCGCG‑GCCGGCGAGC > 1:3420/1‑84 GACAGCGGCACTGCCTGACGGCGGTCGACACGGGTGATTGCACCTTGCAGGTTGCGCTCGCCCGCCTGCGCGCG‑GCCGGCGAGC < 2:3420/84‑1 ACCTTGCAGGTTG‑‑‑‑CGCTCGCCGGC‑CGCGCGCAGGCGGGCGCAACCTGCAAGGTGCAATCACCCGTGTCGACCGCCGTCAGGCAGTGCCGCTGTCGTACTCGCAGCAGCGAATGTGGTTCCTC > 1:1037655/1‑122 ACCTTGCAGGTTG‑‑‑‑CGCTCGCCGGC‑CGCGCGCAGGCGGGCGCAACCTGCAAGGTGCAATCACCCGTGTCGACCGCCGTCAGGCAGTGCCGCTGTCGTACTCGCAGCAGCGAATGTGGTTCCTC < 2:1037655/122‑1 GCAGGTTG‑‑‑‑CGCTCGCCGGC‑CGCGCGCAGGCGGGCGCAACCTGCAAGGTGCAATCACCCGTGTCGACCGCCGTCAGGCAGTGCCGCTGTCGTACTCGCAGCAGCGAATGTGGTT > 1:1770641/1‑113 GCAGGTTG‑‑‑‑CGCTCGCCGGC‑CGCGCGCAGGCGGGCGCAACCTGCAAGGTGCAATCACCCGTGTCGACCGCCGTCAGGCAGTGCCGCTGTCGTACTCGCAGCAGCGAATGTGGTT < 2:1770641/113‑1 CCCGCCTGCGCGCG‑GCCGGCGAGCGCAACCTGCAAGGTGCAATCACCCGTGTCGACCGCCGTCAGGCAGTGCCGCTGTCGTACTCGCAGCAGCGAATGTGGTTCCTCTGGCAGATGGAGCCGGACAGCCCGGCGTACAACGTCGGCGGCA < 1:1061626/150‑1 CAGGGTGCCGCGCAGGCGTGCCATGCCGCCGACGTTGTACGCCGGGCTGTCCGGCTCCATCTGCCAGAGGAACCACATTCGCTGCTGCGAGTACGACAGCGGCACTGCCTGACGGCGGTCGACACGGGTGATTGCACCTTGCAGGTTG‑‑‑‑CGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4825976‑4826126 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcCCGCCTGCGCGCG‑GCCGGCGAGCGCAACCTGCAAGGTGCAATCACCCGTGTCGACCGCCGTCAGGCAGTGCCGCTGTCGTACTCGCAGCAGCGAATGTGGTTCCTCTGGCAGATGGAGCCGGACAGCCCGGCGTACAACGTCGGCGGCA < NC_002947/4826147‑4825999 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |