New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4832785 =	90 (1.230)	6 (0.080)	6/242	NT	6.1%	coding (451/1014 nt)	pvdY	hydroxyproline acetylase
	?	NC_002947	4832812 =	96 (1.350)					coding (424/1014 nt)	pvdY	hydroxyproline acetylase

GAACAGCCTGGCCAGTACCTGTGCGAGCGCGCACTGTTCTGGCAACTGCCGCAGCCGTGGCTGGGCGAGTCGGTTGCCGGGGTATATCCGCAGCAGATGCAGATCAGCAACGGCAAGCGCCACCCGCGCCGGGCGCCCAAGC‑CGCGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4832935‑4832785 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGCGGATATACCCCGGCAACCGACTCGCCCAGCCACGGCTGCGGCAGTTGCCAGAACAGTGCGCGCTCGCACAGGTACTGGCCAGGCTGTTCACCGGCCAGCAGCA  >  NC_002947/4832812‑4832949                                                                                                                                                                                                                                                                                                    GAACAGCCTGGCCAGTACCTGTGCGAGCGCGCACTGTTCTGGCAACTGCCGCAGCCGTGGCTGGGCGAGTCGGTTGCCGGGGTATATCCGCAGCAGATGCAGATCAGCAACGGCAAGCGCCACCCGCGCCGGGCGCCCAAGC‑CGCGGGGC                                                                                                                                             >  2:1255232/1‑150  AACAGCCTGGCCAGTACCTGTGCGAGCGCGCACTGTTCTGGCAACTGCCGCAGCCGTGGCTGGGCGAGTCGGTTGCCGGGGTATATCCGCAGCAGATGCAGATCAGCAACGGCAAGCGCCACCCGCGCCGGGCGCCCAAGC‑CGCGGGGCG                                                                                                                                            >  2:554333/1‑150   ACAGCCTGGCCAGTACCTGTGCGAGCGCGCACTGTTCTGGCAACTGCCGCAGCCGTGGCTGGGCGAGTCGGTTGCCGGGGTATATCCGCAGCAGATGCAGATCAGCAACGGCAAGCGCCACCCGCGCCGGGCGCCCAAGC‑CCCGGGGCGc                                                                                                                                           >  2:622846/1‑149                                     TTCTGGCAACTGCCGCAGCCGTGGCTGGGCGAGTCGGTTGCCGGGGTATATCCGCAGCAGATGCAGATCAGCAACGGCAAGCGCCACCCGCCCCGCG‑GCTTGGGCGCCCGGCGCGGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGC                                                                                                         <  1:546241/150‑1                                                                                                                  CAAGCGCCACCCGCGCCGGGCGCCCAAGC‑C‑‑‑‑‑GCGGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGCGGATATACCCCGGCAACCGACTCGCCCAGCCACGGCTGCGGCAGTTGCCAGAACAGTGCGCGCTC                                        <  1:1017839/133‑1                                                                                                                  CAAGCGCCACCCGCGCCGGGCGCCCAAGC‑C‑‑‑‑‑GCGGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGCGGATATACCCCGGCAACCGACTCGCCCAGCCACGGCTGCGGCAGTTGCCAGAACAGTGCGCGCTC                                        >  2:1017839/1‑133                                                                                                                            CCGCGCCGGGCGCCCAAGC‑CGCGGGGCGGGTGGCGCTTGCCGTTGCTGATCTGCATC                                                                                                               >  1:412986/1‑57                                                                                                                            CCGCGCCGGGCGCCCAAGC‑CGCGGGGCGGGTGGCGCTTGCCGTTGCTGATCTGCATC                                                                                                               <  2:412986/57‑1                                                                                                                                            AGC‑CGCGGGGCGGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGCGGATATACCCCGGCAACCGACTCGCCCAGCCACGGCTGCGGCAGTTGCCAGAACAGTGCGCGCTCGCACAGGTACTGGCCAGGCTGTTCACCGGCCAGCAGCA  <  2:546241/150‑1                                                                                                                                                                                                                                                                                                    GAACAGCCTGGCCAGTACCTGTGCGAGCGCGCACTGTTCTGGCAACTGCCGCAGCCGTGGCTGGGCGAGTCGGTTGCCGGGGTATATCCGCAGCAGATGCAGATCAGCAACGGCAAGCGCCACCCGCGCCGGGCGCCCAAGC‑CGCGGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4832935‑4832785 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGGTGGCGCTTGCCGTTGCTGATCTGCATCTGCTGCGGATATACCCCGGCAACCGACTCGCCCAGCCACGGCTGCGGCAGTTGCCAGAACAGTGCGCGCTCGCACAGGTACTGGCCAGGCTGTTCACCGGCCAGCAGCA  >  NC_002947/4832812‑4832949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.