| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4893624 | 111 (1.520) | 6 (0.110) | 3/194 | NT | 6.1% | intergenic (+54/‑154) | pyk/PP_4302 | pyruvate kinase/urea transporter |
| ? | NC_002947 | = 4893649 | 99 (1.740) | intergenic (+79/‑129) | pyk/PP_4302 | pyruvate kinase/urea transporter | |||||
CCCTGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4893449‑4893624‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgacacaaggccgctcccacagggACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAAGGCACGCCAGCG < NC_002947/4893649‑4893507 CCCTGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTT < 1:816835/150‑1 CCTGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTC > 2:1088871/1‑150 CTGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCG < 2:78453/150‑1 TGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATGGCCGGGGGCGCGTTGCGCCCCTTTCGC < 1:51843/150‑1 tgccTTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGA > 2:233698/5‑150 CCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGC > 2:1012753/1‑150 AGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACCAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGCGCGCGTTGCGCCCCTTTCGCGACACAAGGCCG > 1:41092/1‑150 GCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCT < 1:808045/150‑1 AAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCA > 1:75997/1‑150 GCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAG > 1:1132753/1‑150 CATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGG < 2:1085468/150‑1 CTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCA < 2:493060/121‑1 CTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCA > 1:493060/1‑121 CCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCA < 1:733745/114‑1 CCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCA > 2:733745/1‑114 CCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGC > 1:1556922/1‑96 CCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGC < 2:1556922/96‑1 cgatctCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTG < 1:244865/144‑1 GTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCTTTGTGCCAGCGTGGACTTGGGGGggtcg > 2:244865/1‑145 GTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTG > 2:244895/1‑143 GTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTG < 1:244895/143‑1 TAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTG < 2:1774603/117‑1 TAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTG > 1:1774603/1‑117 TGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGG > 2:776276/1‑43 TGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGG < 1:776276/43‑1 tcgaatgGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTACCAGGTTTGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACC > 1:1107473/8‑150 CGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGC > 1:248127/1‑150 GACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCC < 1:425557/150‑1 GACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCC < 1:1001916/150‑1 GACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCA > 1:940325/1‑125 GACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCA < 2:940325/125‑1 ACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGC > 1:695112/1‑144 ACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGC < 2:695112/144‑1 ACAAGGCCGCTCCCCCAGGGACTGCATTCAATTATGCCAGCGTGGCCCTGTGGGAGCGGCCGTGTTTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAA > 2:512663/1‑150 ACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGTCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGCGAGACAAGCTCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGAGTGTTAGTCGTACCCGGCTTGCCGAA > 1:1089555/1‑150 ACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAA > 1:233698/1‑150 ACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAA < 1:880955/109‑1 ACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAA > 2:880955/1‑109 CAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGGAACGCGCCC‑CCGGCAATCTGAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAA > 2:1425120/1‑150 CAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAA < 2:623477/150‑1 AAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAAG < 1:432302/150‑1 AAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAAG < 1:770445/150‑1 CCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAAGGCAC < 2:1847469/150‑1 TCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAAGGCACGCCA > 2:875672/1‑150 TCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGT > 2:586882/1‑116 TCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGT < 1:586882/116‑1 CCACAGGGACTGCATTCACTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCACAGTATCGATCCGCAGATATTTGTTCGTATCTTGCTTTCCTAAAGGCACGCCAGC > 2:990607/1‑150 CACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCCTCCCGC‑GTCCGAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGCGTTGGCGCAAGTCACGCCAGCG > 1:1088871/1‑150 ACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCT > 2:27986/1‑99 ACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCT < 1:27986/99‑1 CCCTGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4893449‑4893624‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgacacaaggccgctcccacagggACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCC‑CCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAAGGCACGCCAGCG < NC_002947/4893649‑4893507 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |