New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4898121 = | 55 (0.750) | 3 (0.040) | 3/238 | NT | 5.1% | coding (468/957 nt) | PP_4306 | hypothetical protein |
? | NC_002947 | 4898167 = | 60 (0.860) | coding (422/957 nt) | PP_4306 | hypothetical protein |
CCAGTGGCTGCTGGGTGAGCCCTGCCAGCAACGCGAAGTGATCGAGGACGGCCTGACCTACCTGCTGGACTTGGGCGTGCGGCAAAACAATGGCCTGTTCCTCGACATGCGCTATGGCCGCCGCTGGGTGCGCGAGCAGGCGGCGGGCAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4898274‑4898121 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGCAGGGCTCACCCAGCAGCCACTGGCCCGGGCTGTCGGGCAGGTAGCGGTGCTGGATGATGACTGC > NC_002947/4898167‑4898315 CCAGTGGCTGCTGGGTGAGCCCTGCCAGCAACGCGAAGTGATCGAGGACGGCCTGACCTACCTGCTGGACTTGGGCGTGCGGCAAAACAATGGCCTGTTCCTCGACATGCGCTATGGCCGCCGCTGGGTGCGCGAGCAGGCGGCGGGCAA < 1:671135/150‑1 AGTGGCTGCTGGGTGAGCCCTGCCAGCAACGCGAAGTGATCGAGGACGGCCTGACCTACCTGCTGGACTTGGGCGTGCGGCAAAACAATGGCCTGTTCCTCGACATGCGCTATGGCCGCCGCTGGGTGCGCGAGCAGGCGGCGGGCAAGC < 1:1394481/150‑1 GTGGCTGCTGGGTGAGCCCTGCCAGCAACGCGAAGTGATCGAGGACGGCCTGACCTACCTGCTGGACTTGGGCGTGCGGCAAAACAATGGCCTGTTCCTCGACATGCGCTATGGCCGCCGCTGGGTGCGCGAGCAGGCGGCGGGCAAGCG > 2:1339338/1‑150 GCCTGTTCCTCGACATGCGCTATGGCCGCCGCTGGGTGCGCGAGCAGGCGGCGGGCAAGCGCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGCAGG > 1:1409339/1‑150 CGCCGCTGGGTGCGCGAGCAGGCGGCGGGCAAGCGCATGTCGAGGAACAGGCCATTGTT < 1:586351/59‑1 CGCCGCTGGGTGCGCGAGCAGGCGGCGGGCAAGCGCATGTCGAGGAACAGGCCATTGTT > 2:586351/1‑59 GCATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGCAGGGCTCACCCAGCAGCCACTGGCCCGGGCTGTCGGGCAGGTAGCGGTGCTGGATGATGACTG < 2:164045/150‑1 CATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGCAGGGCTCACCCAGCAGCCACTGGCCCGGGCTGTCGGGCAGGTAGCGGTGCTGGATGATGACTGC < 2:1778985/150‑1 CATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGCAGGGCTCACCCAGCAGCCACTGGCCCGGGCTGTCGGGCAGGTAGCGGTGCTGGATGATGACTGC < 2:475270/150‑1 CCAGTGGCTGCTGGGTGAGCCCTGCCAGCAACGCGAAGTGATCGAGGACGGCCTGACCTACCTGCTGGACTTGGGCGTGCGGCAAAACAATGGCCTGTTCCTCGACATGCGCTATGGCCGCCGCTGGGTGCGCGAGCAGGCGGCGGGCAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4898274‑4898121 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcgcATGTCGAGGAACAGGCCATTGTTTTGCCGCACGCCCAAGTCCAGCAGGTAGGTCAGGCCGTCCTCGATCACTTCGCGTTGCTGGCAGGGCTCACCCAGCAGCCACTGGCCCGGGCTGTCGGGCAGGTAGCGGTGCTGGATGATGACTGC > NC_002947/4898167‑4898315 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |