| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5077327 = | 72 (0.990) | 7 (0.100) | 6/236 | NT | 9.8% | intergenic (+74/+34) | PP_4470/mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter |
| ? | NC_002947 | 5077353 = | 60 (0.860) | intergenic (+100/+8) | PP_4470/mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter | |||||
ATGACCTTGGCCCGCTTGGGGCGCGACCCTGCGATGGGGGCGAGTGTGATGATCACTGCTGTGACCGACAGCGGTGGTTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGTGGGAACAATCCCGCAGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5077480‑5077327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggaGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATCAGCACGCCCATCA > NC_002947/5077353‑5077500 ATGACCTTGGCCCGCTTGGGGCGCGACCCTGCGATGGGGGCGAGTGTGATGATCACTGCTGTGACCGACAGCGGTGGTTTCTTCATCTTCCTGGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGTGGGAACAATCCCGCA < 1:31779/150‑1 GACCTGGGCCCGCTTGGGGCGCGACCCTGCGATGGGGGCGAGTGTGATGATCACTGCTGTGACCGACAGCGGTGGTTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGTGGGAACAATCCCGCAGG < 2:436060/150‑1 ggcgTGGCCCGCTTGGGGCGCGACACTCCGATGGGGGAGAGGTTGATGATCACTGCTGTGACCGACAGCGGTGGTTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGTGGGAACAATCCCGCAGGG < 2:1286512/146‑1 GTGGTTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAA < 1:1028364/95‑1 GTGGTTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAA > 2:1028364/1‑95 TCCCTGTGGGAACAATCCCGCAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGG > 2:782277/1‑150 TCCCTGTGGGAACAATCCCGCAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAT > 1:610403/1‑70 TCCCTGTGGGAACAATCCCGCAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGAT < 2:610403/70‑1 CCTGTGGGAACAATCCCGCAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTC > 1:1451567/1‑150 CAATCCCGCAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATCA < 1:782277/150‑1 GCAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATCTGCACGac < 2:1451567/150‑3 GAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATCAGCACGCCCATCA < 2:1568934/150‑1 ATGACCTTGGCCCGCTTGGGGCGCGACCCTGCGATGGGGGCGAGTGTGATGATCACTGCTGTGACCGACAGCGGTGGTTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGTGGGAACAATCCCGCAGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5077480‑5077327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggaGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATCAGCACGCCCATCA > NC_002947/5077353‑5077500 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |