| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5112607 = | 89 (1.220) | 6 (0.100) | 6/204 | NT | 10.2% | intergenic (‑148/+118) | rluB/PP_4497 | 23S rRNA pseudouridylate synthase B/hypothetical protein |
| ? | NC_002947 | 5112712 = | 32 (0.530) | intergenic (‑253/+13) | rluB/PP_4497 | 23S rRNA pseudouridylate synthase B/hypothetical protein | |||||
GGGGAGAGGAGCCTGAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5112777‑5112607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaagaggccagcacaGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTGGTCTCCTCTTTC > NC_002947/5112712‑5112860 GGGGAGAGGAGCCTGAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGT > 2:1492758/1‑150 AGGAGCCTGAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGC > 2:360988/1‑150 CCTGAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGA > 2:1276433/1‑150 CCTGAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGA > 2:1230779/1‑150 CTGAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAG < 2:830806/150‑1 TGAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTTGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGCGCGGGCGTGCCCGCGAAGAGG > 1:947257/1‑150 GAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCTCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGC < 1:1532793/150‑1 GAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGC < 1:1276433/150‑1 AGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGA < 2:846992/146‑1 AGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGA > 1:846992/1‑146 CTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTCCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGC > 2:1221612/1‑150 TCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCA < 1:1230779/150‑1 GAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAG < 2:502333/133‑1 GAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAG > 1:502333/1‑133 GGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGA < 1:28209/130‑1 GGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGA > 2:28209/1‑130 TCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCGCAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCT > 2:1777535/1‑150 TCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGA > 1:227016/1‑104 TCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGA < 2:227016/104‑1 CCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAA > 2:688039/1‑95 CCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAA < 1:688039/95‑1 CTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCA > 1:1256021/1‑149 CTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCA < 2:1256021/149‑1 TCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCGCAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGG < 1:1777535/150‑1 TTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAGCATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCT > 2:1318516/1‑150 TGCGCGAGCATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATG < 1:1318516/150‑1 TGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTA < 1:1508572/150‑1 GCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTAC > 1:218367/1‑150 CCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAGATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGG > 2:1862462/1‑150 GCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCC < 1:1391185/83‑1 GCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCC > 2:1391185/1‑83 GAAGAGGCCAGGACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGC < 1:389833/150‑1 GAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTAAGGAAGa < 2:485469/150‑2 AAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACTGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCT > 1:1435740/1‑150 AGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTG < 1:1445728/150‑1 AGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTG < 1:1518780/150‑1 GGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTGGTC < 1:1311335/150‑1 GCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCG > 2:1586539/1‑92 GCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCG < 1:1586539/92‑1 GCCAGCACAGGCAGCAGATCAATCAGGGCTGAGACTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGAGCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTGGTCT > 2:1676033/1‑150 CAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTGGTCTCC > 2:1421677/1‑150 AGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATAGCATCGAGTTCCACCAACAGGCTACGGAAGCTGGTCTCCT < 1:1826749/150‑1 AGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACAGTAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTGGTCTCCTCTTTC < 1:700654/150‑1 AGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTACACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTGGTCTCCTCTTTC < 2:218367/150‑1 GGGGAGAGGAGCCTGAGCCTCCGGTGGAGGAGGAGATCAAGGCTCAGCCCTGATTGATCTGCTGCCTGTGCTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGGGTATCACAGGCCCCGAAGGTTGCGCGAACATGTAGGAGCGGGCGTGCCCGCGAAGAGGCCAGCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5112777‑5112607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaagaggccagcacaGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCTACGGAAGCTGGTCTCCTCTTTC > NC_002947/5112712‑5112860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |