| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5169403 | 93 (1.270) | 8 (0.120) | 8/236 | NT | 8.3% | coding (973/1365 nt) | PP_4547 | glutamine synthetase |
| ? | NC_002947 | = 5169415 | 88 (1.270) | coding (985/1365 nt) | PP_4547 | glutamine synthetase | |||||
AACAACCTGTTCGCCAGCGAAGACAAGGCCGGCACCCCGCTGCTGCGCCAGGCCGTGGCCGGCATGCTGCGCCACCTGCGCGACTCGCTGCTGCTGTTCTGCCCCAACGCCAACTCCTTCCGCCGCTTCCAGGCCAACAGCTATGCGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5169253‑5169403‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccccAGGTTGGCGCCAGGGGCGCATAGCTGTTGGCCTGGAAGCGGCGGAAGGAGTTGGCGTTGGGGCAGAACAGCAGCAGCGAGTCGCGCAGGTGGCGCAGCATGCCGGCCACGGCCTGGCGCAGCAGCGGGGTGCCGGCCTTGTCTTCGCTG < NC_002947/5169415‑5169267 AACAACCTGTTCGCCAGCGAAGACAAGGCCGGCACCCCGCTGCTGCGCCAGGCCGTGGCCGGCATGCTGCGCCACCTGCGCGACTCGCTGCTGCTGTTCTGCCCCAACGCCAACTCCTTCCGCCGCTTCCAGGCCAACAGCTATGCGCCC > 1:980286/1‑150AACAACCTGTTCGCCAGCGAAGACAAGGCCGGCACCCCGCTGCTGCGCCAGGCCGTGGCCGGCATGCTGCGCCACCTGCGCGACTCGCTGCTGCTGTTCTGCCCCAACGCCAACTCCTTCCGCCGCTTCCAGGCCAACAGCTATGCGCCC > 2:449283/1‑150 CCAGCGAAGACAAGGCCGGCACCCCGCTGCTGCGCCAGGCCGTGGCCGGCATGCTGCGCCACCTGCGCGACTCGCTGCTGCTGTTCTGCCCCAACGCCAACTCCTTCCGCCGCTTCCAGGCCAACAGCTATGCGCCCCAGGTTGGCGCCA > 1:84788/1‑150 CCGGCACCCCGCTGCTGCGCCAGGCCGTGGCCGGCATGCTGCGCCACCTGCGCGACTCGCTGCTGCTGTTCTGCCCCAACGCCAACTCCTTCCGCCGCTTCCAGGCCAACAGCTATGCGCCCCAGGTTGGCGCCAGGGGCGCATAGCTGT < 2:84788/150‑1 tctGGCCGTGGCCGGCATGCTGCCCCCCCTGCCCAACTCGCTTCTGCTGTTCTGCCCCAACGCCAACTCCTTCCGCCGCTTCCAGGCCAACAGCTATGCGCCCCAGGTTGGCGCCAGGGGCGCATAGCTGTTGGCCTGGAAGCGGCGGAA < 2:1772636/147‑1 tctCTTCCGCCGCTTCCAGGCCAACAGCTATGCGCCCCCGGCGCCAACCTGGGGCGCATAGCTGTTGGCCTGGAAGCGGCGGAAGGAGTTGGCGTTGGGGCAGAACAGCAGCAGCGAGTCGCGCAGGTGGCGCAGCATGCCGGCCACGGC < 1:1772636/147‑1 CTTCCAGGCCAACAGCTATGCGCCCCAGGTTGGCGCCAGGGGCGCATAGCTGTTGGCCTGGAAGCGGCGGAAGGAGTTGGCGTTGGGGCAGAACAGCAGCAGCGAGTCGCGCAGGTGGCGCAGCATGCCGGCCACGGCCTGGCGCAGCAG > 2:176590/1‑150 AGGCCAACAGCTATGCGCCCCAGGTTGGCGCCAGGGGCGCAT < 1:1263361/42‑1 AGGCCAACAGCTATGCGCCCCAGGTTGGCGCCAGGGGCGCAT > 2:1263361/1‑42 AACAGCTATGCGCCCCAGGTTGGCGCCAGGGGCGCATAGCTGTTGGCCTGGAAGCGGCGGAAGGAGTTGGCGTTGGGGCAGAACAGCAGCAGCGAGTCGCGCAGGTGGCGCAGCATGCCGGCCACGGCCTGGCGCAGCAGCGGGGTGCCG < 1:176590/150‑1 CGCCCCAGGTTGGCGCCAGGGGCGCATAGCTGTTAGCCTGGAAGCGGCGGAAGGAGTTGGCGTTGGGGCAGAACAGCAGCAGCGAGTCGCGCAGGTGGCGCAGCATGCCGGTTACGGCCTGGCGCAGCAGCGGGGTGCCGGCCTTGTCTT < 1:1237771/150‑1 GCCCCAGGTTGGCGCCAGGGGCGCATAGCTGTTGGCCTGGAAGCGGCGGAAGGAGTTGGCGTTGGGGCAGAACAGCAGCAGCGAGTCGCGCAGGTGGCGCAGCATGCCGGCCACGGCCTGGCGCAGCAGCGGGGTGCCGGCCTTGTCTTC < 1:1600113/150‑1 CCCAGGTTGGCGCCAGGGGCGCATAGCTGTTGGCCTGGAAGCGGCGGAAGGAGTTGGCGTTGGGGCAGAACAGCAGCAGCGAGTCGCGCAGGTGGCGCAGCATGCCGGCCACGGCCTGGCGCAGCAGCGGGGTGCCGGCCTTGTCTTCGC > 1:304960/1‑150 CAGGTTGGCGCCAGGGGCGCATAGCTGTTGGCCTGGAAGCGTCGGAAGGAGTTGGCGTTGGGGCAGAACAGCAGCAGCGAGTCGCGCAGGTGGCGCAGCATGCCGGCCACGGCCTGGCGCAGCAGCGGGGTGCCGGCCTTGTCTTCGCTG < 2:454396/150‑1 CAGGTTGGCGCCAGGGGCGCATAGCTGTTGGCCTGGAAGCGGCGGAAGGAGTTGGCGTTGGGGCAGAACAGCAGCAGCGAGTCGCGCAGGTGGCGCAGCATGCCGGCCACGGCCTGGCGCAGCAGCGGGGTGCCGGCCTTGTCTTCGCTG > 2:214145/1‑150 AACAACCTGTTCGCCAGCGAAGACAAGGCCGGCACCCCGCTGCTGCGCCAGGCCGTGGCCGGCATGCTGCGCCACCTGCGCGACTCGCTGCTGCTGTTCTGCCCCAACGCCAACTCCTTCCGCCGCTTCCAGGCCAACAGCTATGCGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5169253‑5169403‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccccAGGTTGGCGCCAGGGGCGCATAGCTGTTGGCCTGGAAGCGGCGGAAGGAGTTGGCGTTGGGGCAGAACAGCAGCAGCGAGTCGCGCAGGTGGCGCAGCATGCCGGCCACGGCCTGGCGCAGCAGCGGGGTGCCGGCCTTGTCTTCGCTG < NC_002947/5169415‑5169267 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |