| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5192772 = | 57 (0.780) | 14 (0.240) | 8/198 | NT | 27.6% | intergenic (+105/‑97) | PP_4572/PP_4573 | hypothetical protein/AAA family ATPase |
| ? | NC_002947 | 5192841 = | 28 (0.480) | intergenic (+174/‑28) | PP_4572/PP_4573 | hypothetical protein/AAA family ATPase | |||||
GAGGGTAATGGCCGCGTTTACCGCCAGTTTCAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5192943‑5192772‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtttacccgcgaagaggcccgCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGGCACCGGCAAAACC > NC_002947/5192841‑5192988 GAGGGTAATGGCCGCGTTTACCGCCAGTTTCAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCG > 2:1554683/1‑150 GGGTAATGGCCGCGTTTACCGCCAGTTTCAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGG < 1:1594679/150‑1 GGTAATGGCCGCGTTTACCGCCAGTTTCAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGCGCTTTCCTGAGCGGTGCCCCTGTTTGCCCGCGCCTAATAAGGTTGTAGGGGCGGGT < 1:1791960/150‑1 TAATGGCCGCGTTTACCGCCAGTTTCAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGG < 1:1068130/147‑1 TAATGGCCGCGTTTACCGCCAGTTTCAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGG > 2:1068130/1‑147 TAAGGGCCGCGTTTACCGCCAGTTTCAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTT < 2:41463/150‑1 ATGGCCGCGTTTACCGCCAGTTTCAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGTCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTAC < 2:265481/150‑1 CCGCGTTTACCGCCAGTTTCAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGC < 1:1592153/150‑1 GCCAGTTTCAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCG > 1:286151/1‑150 GCCAGTTTCAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACC < 2:328623/136‑1 GCCAGTTTCAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACC > 1:328623/1‑136 CAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAA < 1:433306/134‑1 CAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAA > 2:433306/1‑134 tcgtGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGG < 2:367421/95‑1 TCGTGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGG > 1:367421/1‑99 TTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCC > 2:1223630/1‑108 TTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCC < 1:1223630/108‑1 GGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCC > 1:1577660/1‑95 GGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCC < 2:1577660/95‑1 GGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGAC > 2:371782/1‑126 GGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGAC < 1:371782/126‑1 CCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACATATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCT > 2:1773390/1‑150 CCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCT > 1:363953/1‑150 CCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCT > 1:962576/1‑150 CCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCT > 2:1874366/1‑150 CCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATGACCCT > 2:443786/1‑150 CCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAG > 2:1004318/1‑89 CCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAG < 1:1004318/89‑1 CCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTT < 1:767756/84‑1 CCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTT > 2:767756/1‑84 CGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGG < 1:881237/127‑1 CGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGG > 2:881237/1‑127 AATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCC < 1:1773390/150‑1 GCGGGTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAACCCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGG < 2:1537820/150‑1 GTTTACCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACACCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTTGCGGTAAACGCGCCCATTACAAGCGAACGCCCGCTGTCGGTCAAGGGCGA > 1:1491/1‑150 CCCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGG < 1:1183076/150‑1 CCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGG > 2:814422/1‑150 CCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTC < 2:926752/136‑1 CCGCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTC > 1:926752/1‑136 GCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTATGTCGCCACAGATGACCTGAAACTGGCG > 2:189119/1‑95 GCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTATGTCGCCACAGATGACCTGAAACTGGCG < 1:189119/95‑1 GCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGGCA > 2:339387/1‑150 GCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGGCA < 2:363953/150‑1 GCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGGCA < 1:1874366/150‑1 GCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTAC > 2:1569055/1‑68 GCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTAC < 1:1569055/68‑1 GCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAG > 2:1911581/1‑47 GCGAAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAG < 1:1911581/47‑1 AAGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGGCACCG > 2:78265/1‑150 AGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGTCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGGCACCGG < 2:668250/150‑1 AGAGGCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGGCACCGG > 2:1011619/1‑150 GGCCCGCAAAGCCCTAAACAGAGGACAAACCGCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCGACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGGCACCAGCAA > 1:310810/1‑150 GCCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGGCACCGGCAAA > 2:1054980/1‑150 CCCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGGCACCGGCAAAA < 1:814422/150‑1 CCGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGGCACCGGCAAAAC > 2:1347547/1‑150 CGCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGGCACCGGCAAAACC < 1:1054980/150‑1 GAGGGTAATGGCCGCGTTTACCGCCAGTTTCAGGTCATCTGTGGCGACGTAGTCGCGGGTGCCTTCGAACTTCATGGGGGTTTGTCCTCTGTTTAGGGCTTTGCGGGCCTCTTCGCGGGTAAACCCGCGCCTAATAAGGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5192943‑5192772‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtttacccgcgaagaggcccgCAAAGCCCTAAACAGAGGACAAACCCCCATGAAGTTCGAAGGCACCCGCGACTACGTCGCCACAGATGACCTGAAACTGGCGGTAAACGCGGCCATTACCCTCGAACGCCCGCTGTTGGTCAAGGGCGAACCGGGCACCGGCAAAACC > NC_002947/5192841‑5192988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |