| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5288471 | 41 (0.560) | 6 (0.110) | 5/188 | NT | 15.8% | intergenic (‑104/+80) | PP_4660/mdaB | LysR family transcriptional regulator/drug activity modulator B |
| ? | NC_002947 | = 5288505 | 33 (0.600) | intergenic (‑138/+46) | PP_4660/mdaB | LysR family transcriptional regulator/drug activity modulator B | |||||
CTCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5288293‑5288471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcttcgcgggcttgcccgctcccacaGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCATACAGGCGCCGCTGGACTTGGCCTCGACAAGCGGTTATCTAATCCTTGCACAGACCAACCACAGGCCCTGATGTGAAAACC < NC_002947/5288505‑5288359 CTCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGG < 1:657925/150‑1 CAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTC > 2:382348/1‑150 AGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTAGAGTTCTTCGGATCGGATTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCTAGCGGCGCCGATATGGGCCTCTTCG > 2:637114/1‑150 AAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGC < 2:1206601/150‑1 CGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGC < 1:138776/150‑1 CCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGC > 2:236902/1‑150 GCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCATATCGGGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTC < 1:19991/150‑1 TCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCTCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCAC < 1:356096/150‑1 ATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGC < 2:33623/129‑1 ATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGC > 1:33623/1‑129 GACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCaa > 1:1514378/1‑131 GACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCaa < 2:1514378/133‑3 GGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTA > 1:954677/1‑150 TCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCAAGCCCGCgaa < 1:125799/112‑4 TCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCAAGCCCGCgaa > 2:125799/1‑109 CGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTT < 1:569867/150‑1 TTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGAAGGTTTCAAGGACTTTGCAGTACTTGTGGGA < 1:1724298/150‑1 CATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGG < 2:954677/150‑1 CAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTT < 1:766788/137‑1 CAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTT > 2:766788/1‑137 CTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCATACAGGCGCCGCTGGACTTGGCCTCGACAAGCGGTTATCTAATCCTTGCACAGACCA > 2:1498352/1‑150 CTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCATACAGGCGCCGCTGGACTTG < 1:877912/113‑1 CTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCATACAGGCGCCGCTGGACTTG > 2:877912/1‑113 TTCGCGGGCTTACCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGG < 2:539022/70‑1 TTCGCGGGCTTACCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGG > 1:539022/1‑70 GGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCATACAGGCGCCGCTGGACTTGGCCTCGACAAGCGGTTATCTAATCCTTGCACAGACCAACCACAGGC < 2:315733/150‑1 GCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAG < 1:1221441/78‑1 GCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAG > 2:1221441/1‑78 TTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCATACAGGCGCCGCTGGACTTGGCCTCGACAAGCGGTTATCTAATCCTTGCACAGACCAACCACAGGCCCT > 1:1743579/1‑150 CCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCATACAGGCGCCGCTGGACTTGGCCTCGACAAGCGGTTATCTAATCCTTGCACAGACCAACCACAGGC > 2:32523/1‑144 CCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCATACAGGCGCCGCTGGACTTGGCCTCGACAAGCGGTTATCTAATCCTTGCACAGACCAACCACAGGC < 1:32523/144‑1 CCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCA > 1:1920796/1‑41 CCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCA < 2:1920796/41‑1 CCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTTGGGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCATACAGGCGCCGCTGGACTTGGCCTCGACAAGCGGTTATCTAATCCTTGCACAGACCAACCACAGGCCCTGATG > 1:1610211/1‑150 GCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCATACAGGCGCCGCTGGACTTGGCCTCGACAAGCGGTTATCTAATCCTTGCACAGACCAACCACAGGCCCTGATGTG > 2:872745/1‑150 TCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCATACAGGCGCCGCTGGACTTGGCCTCGACAAGCGGTTATCTAATCCTTGCACAGACCAACCACAGGCCCTGATGTGAA > 2:1503741/1‑150 ACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCATACAGGCGCCGCTGGACTTGGCCTCGACAAGCGGTTATCTAATCCTTGCACAGACCAACCACAGGCCCTGATGTGAAAACC > 2:741214/1‑150 CTCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5288293‑5288471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcttcgcgggcttgcccgctcccacaGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCATACAGGCGCCGCTGGACTTGGCCTCGACAAGCGGTTATCTAATCCTTGCACAGACCAACCACAGGCCCTGATGTGAAAACC < NC_002947/5288505‑5288359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |