| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5350523 | 60 (0.820) | 6 (0.080) | 6/240 | NT | 9.0% | intergenic (+12/+70) | PP_4704/PP_4705 | hypothetical protein/glyoxalase |
| ? | NC_002947 | = 5350566 | 64 (0.910) | intergenic (+55/+27) | PP_4704/PP_4705 | hypothetical protein/glyoxalase | |||||
GGGCAAGCTGGAAGACGACCGGGTGTACTTCATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5350409‑5350523‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaCGCCCGCTCCCACAGGTAGTGCGCAGGCCTGTGGGGGCGGGCCTGCCAGAGGGGATTACTCGGCATCCAGGTGCATCGGTGTCACCACCCGGCCATCGCTTTGAGGCTGCCCCAGGCTGGTATCGATGAAGTACACCCGGTCGTCTTC < NC_002947/5350566‑5350419 gctCAAGCTGGAAGACGACCGGGTGTACTTCATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTG < 1:594432/109‑1GGGCAAGCTGGAAGACGACCGGGTGTACTTCATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTG > 2:594432/1‑112 AGCTGGAAGACGACCGGGTGTACTTCATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCACGCCCGCTCCCACAGGTAGTGCGCAGGCCTGTGGGGGCGG < 1:149550/150‑1 GGAAGACGACCGGGTGTACTTCATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCACGCCCGCTCCCACAGGTAGTGCGCAGGCCTGTGGGGGCGGGCCT < 2:1055906/150‑1 TCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCACGCCCGCTCCCACAGGTAGTGCGCAGGCCTGTGGGGGCGGGCCTGCCAGAGGG < 1:867103/114‑1 TCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCACGCCCGCTCCCACAGGTAGTGCGCAGGCCTGTGGGGGCGGGCCTGCCAGAGGG > 2:867103/1‑114 CTGGATGCCGAGTAATCCCCTCTGGCACGCCCGCTCCCACAGGTAGTGCGCAGGCCTGTGGGGGC > 1:223879/1‑65 CTGGATGCCGAGTAATCCCCTCTGGCACGCCCGCTCCCACAGGTAGTGCGCAGGCCTGTGGGGGC < 2:223879/65‑1 CACGCCCGCTCCCACAGGTAGTGCGCAGGCCTGTGGGGGCGGGCCTGCCAGAGGGGATTACTCGGCATCCAGGTGCATCGGTGTCACCACCCGGCCATCGCTTTGAGGCTGCCCCAGGCTGGTATCGATGAAGTACACCCGGTCGTCTTC < 1:1503646/150‑1 GGGCAAGCTGGAAGACGACCGGGTGTACTTCATCGATACCAGCCTGGGGCAGCCTCAAAGCGATGGCCGGGTGGTGACACCGATGCACCTGGATGCCGAGTAATCCCCTCTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5350409‑5350523‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaCGCCCGCTCCCACAGGTAGTGCGCAGGCCTGTGGGGGCGGGCCTGCCAGAGGGGATTACTCGGCATCCAGGTGCATCGGTGTCACCACCCGGCCATCGCTTTGAGGCTGCCCCAGGCTGGTATCGATGAAGTACACCCGGTCGTCTTC < NC_002947/5350566‑5350419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |