| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5356233 | 46 (0.630) | 5 (0.070) | 5/232 | NT | 9.9% | intergenic (‑82/+35) | rbfA/infB | ribosome‑binding factor A/translation initiation factor IF‑2 |
| ? | NC_002947 | = 5356248 | 48 (0.700) | intergenic (‑97/+20) | rbfA/infB | ribosome‑binding factor A/translation initiation factor IF‑2 | |||||
CGACGGATCAGCTCGGCCAGCTCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGCCCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5356078‑5356233‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcaag‑cG‑CCTGCTA‑CAGGGCGGCTTGCGGTACCTCTTCAGGTAGCGCCCGGTCAGGCATTCGTCTGTCCGGGCGTTTGCCGCTTTAAGTTACAGGTAGCAAGAATGGCCAAAGAATATAGCCGTACCCAACGTATTGGCGATCAGATGCAG < NC_002947/5356248‑5356104 CGACGGATCAGCTCGGCCAGCTCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGCCCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACC < 2:1082381/150‑1 GACGGATCAGCTCGGCCAGCTCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGCCCGGACAGACGAATGCCTGACCGGGCGCTACCTGAATAGGTACCG > 2:1320657/1‑150 GGATCAGCTCGGCCAGCTCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGCCCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAA < 2:343518/150‑1 TCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGCCCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAG‑CG‑CCTGCTA‑CAGGGCG > 1:1246364/1‑150 GCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGCCCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAG‑CG‑CCTGCTA‑CAGGGCGGCTT < 2:1246364/150‑1 CCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGCCCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAG‑CG‑CCTGCTA‑CAGGGCGGCTTGCGGTACCTCTTCA > 2:768349/1‑150 GTAACTTAAAGCGGCAAACGCCCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACC < 1:1402661/65‑1 GTAACTTAAAGCGGCAAACGCCCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACC > 2:1402661/1‑65 GCTACCTGAAGAGGTACCGCAAGCCGCCCTG‑TAGCA‑GGC‑GCTTGCGGTACCTCTTCAGGTAGCGCCCGGTCAGGCATTCGTCTGTCCGGGCGTTTGCCGCTTTAAGTTACAGGTAGCAAGAATGGCCAAAGAATATAGCCGTACCCAACG > 1:768349/1‑150 TGAAGAGGTACCGCAAGCCGCCCTG‑TAGCA‑GGC‑GCTTGCGGTACCTATTCCGGTAGCGCCCGGTCAGGCATTCGTCTGTCCGGGCGTTTGCCGCTTTAAGTTACAGGTAGCAAGAATGGCCAAAGAATATAGCCGTACCCAACGTATTGG > 1:1320657/1‑150 caCAAG‑CG‑CCTGCTA‑CAGGGCGGCTTGCGGTACCTCTTCAGGTAGCGCCCGGTCAGGCATTCGTCTGTCCGGGCGTTTGCCGCTTTAAGTTACAGGTAGCAAGAATGGCCAAAGAATATAGCCGTACCCAACGTATTGGCGATCA > 1:1405648/3‑145 caCAAG‑CG‑CCTGCTA‑CAGGGCGGCTTGCGGTACCTCTTCAGGTAGCGCCCGGTCAGGCATTCGTCTGTCCGGGCGTTTGCCGCTTTAAGTTACAGGTAGCAAGAATGGCCAAAGAATATAGCCGTACCCAACGTATTGGCGATCA < 2:1405648/143‑1 gcgAG‑CG‑CCTGCTA‑CAGGGCGGCTTGCGGTACCTCTTCAGGTAGCGCCCGGTCAGGCATTCGTCTGTCCGGGCGTTTGCCGCTTTAAGTTACAGGTAGCAAGAATGGCCAAAGAATATAGCCGTACCCAACGTATTGGCGATCAGATGCA > 2:28784/4‑150 CAAG‑CG‑CCTGCTA‑CAGGGCGGCTTGCGGTACCTCTTCAGGTAGCGCCCGGTCAGGCATTCGTCTGTCCGGGCGTTTGCCGCTTTAAGTTACAGGTAGCAAGAATGGCCAAAGAATATAGCCGTACCCAACGTATTGGCGATCAGATGCAG < 1:1222249/150‑1 CGACGGATCAGCTCGGCCAGCTCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGCCCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5356078‑5356233‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcaag‑cG‑CCTGCTA‑CAGGGCGGCTTGCGGTACCTCTTCAGGTAGCGCCCGGTCAGGCATTCGTCTGTCCGGGCGTTTGCCGCTTTAAGTTACAGGTAGCAAGAATGGCCAAAGAATATAGCCGTACCCAACGTATTGGCGATCAGATGCAG < NC_002947/5356248‑5356104 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |