| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5426181 = | 70 (0.960) | 4 (0.060) | 4/240 | NT | 5.1% | coding (669/1239 nt) | PP_4765 | hypothetical protein |
| ? | NC_002947 | 5426230 = | 82 (1.160) | coding (718/1239 nt) | PP_4765 | hypothetical protein | |||||
GGTCGAGCAACAACACCCCGCGGCCTTCACGGTGAATGGCCTCGCGGACCGGTGCCGACCAGGCATACACCAGGCTGCCTTCCACGCCTTGAGCGGTGAGAATGAACTCGCCCTTGCGCGGTGCGCTGCCCGGGACGCTGAGGGCGATGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5426332‑5426181‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcATTCTCACCGCTCAAGGCGTGGAAGGCAGCCTGGTGTATGCCTGGTCGGCACCGGTCCGCGAGGCCATTCACCGTGAAGGCCGCGGGGTGTTGTTGCTCGACCTGCTGCCGGACAAGCCTGTGGACAAGATTGCCCAGGCATTGGC > NC_002947/5426230‑5426375 GGTCGAGCAACAACACCCCGCGGCCTTCACGGTGAATGGCCTCGCGGACCGGTGCCGACCAGGCATACACCAGGCTGCCTTCCACGCCTTGAGCGGTGAGAATGAACTCGCCCTTGCGCGGTGCGCTGCCCGGGACGCTGAGGGCGATGT < 2:205754/150‑1GGTCGAGCAACAACACCCCGCGGCCTTCACCGTGAGTCGCCTCGCTGACCGGTGCCGACCAGGCATACACCAGGCTGCCTTCCACGCCTTGGGCGGTGAGAATGAACTCGCCCTTGCGCGGTGCGCTGCCCGGGACGCTGAGGGCGATGT < 2:1908814/150‑1 GTCGAGCAACAACACCCCGCGGCCTTCACGGTGAATGGCCTCGCGGACCGGTGCCGACCAGGCATACACCAGGCTGCCTTCCACGCCTTGAGCGGTGAGAATGAACTCGCCCTTGCGCGGTGCGCTGCCCGGGACGCTGAGGGCGATGTT > 2:367508/1‑150 ATGAACTCGCCCTTGCGCGGTGCGCTGCCCGGGACGCTGAGGGCGATGTTCATTCTCACCGCTCAAGGCGTGGAAGGCAGCCTGGTGTATGCC > 1:913996/1‑93 ATGAACTCGCCCTTGCGCGGTGCGCTGCCCGGGACGCTGAGGGCGATGTTCATTCTCACCGCTCAAGGCGTGGAAGGCAGCCTGGTGTATGCC < 2:913996/93‑1 ACTCGCCCTTGCGCGGTGCGCTGCCCGGGACGCTGAGGGCGATGTTCATTCTCACCGCTCAAGGCGTGGAAGGCAGCCTGGTGTATGCCTGGTCGGCACCG > 1:1425557/1‑101 ACTCGCCCTTGCGCGGTGCGCTGCCCGGGACGCTGAGGGCGATGTTCATTCTCACCGCTCAAGGCGTGGAAGGCAGCCTGGTGTATGCCTGGTCGGCACCG < 2:1425557/101‑1 GTTCATTCTCACCGCTCAAGGCGTGGAAGGCAGCCTGGTGTATGCCTGGTCGGCACCGGTCCGCGAGGCCATTCACCGTGAAGGCCGCGGGGTGTTGTTGCTCGACCTGCTGCCGGACAAGCCTGTGGACAAGATTGCCCAGGCATTGGC > 2:855724/1‑150 GGTCGAGCAACAACACCCCGCGGCCTTCACGGTGAATGGCCTCGCGGACCGGTGCCGACCAGGCATACACCAGGCTGCCTTCCACGCCTTGAGCGGTGAGAATGAACTCGCCCTTGCGCGGTGCGCTGCCCGGGACGCTGAGGGCGATGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5426332‑5426181‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcATTCTCACCGCTCAAGGCGTGGAAGGCAGCCTGGTGTATGCCTGGTCGGCACCGGTCCGCGAGGCCATTCACCGTGAAGGCCGCGGGGTGTTGTTGCTCGACCTGCTGCCGGACAAGCCTGTGGACAAGATTGCCCAGGCATTGGC > NC_002947/5426230‑5426375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |