| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5485172 = | 99 (1.360) | 9 (0.160) | 8/196 | NT | 11.0% | intergenic (+30/‑117) | purH/purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase |
| ? | NC_002947 | 5485246 = | 67 (1.160) | intergenic (+104/‑43) | purH/purD | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase/phosphoribosylamine‑‑glycine ligase | |||||
CCAGGCCAGGGCGTGCTCACGGCCACCGCTGCCGATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5485339‑5485172‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggcaagcccgctcccacagTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAAAGTCTTCGTTGCCCCGGGCAACGCC > NC_002947/5485246‑5485393 CCAGGCCAGGGCGTGCTCACGGCCACCGCTGCCGATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGG < 2:557194/150‑1CCAGGCAAGGGCGTTCTCCCGGCCACCGCTGCGGATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGAGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGG < 2:603653/150‑1 cgatctAGGGCGTGATCAAGGCCACAGCTGCCGATGTGCAAAATCTCCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGG < 2:990028/144‑1 CAGGCCAGGGCGTGCTCACGGCCACCGCTGCCGATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGG > 2:788955/1‑150 AGGCCAGGGCGTGCTCACGGCCACCGCTGCCGATGATCAAAACTTTCATGTCAAAAGCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGC > 2:936476/1‑150 AGGGCGTGCTCACGGCCACCGCTGCCGATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCC > 2:1679874/1‑150 GGGCGTGCTCACGGCCACCGCTGCCGATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGCAGTCGGCGGTGAATCCACCATCGTATTCGCGGGCAgatcg > 1:990028/1‑145 GTGCTCACGGCCACCGCTGCCGATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGC > 2:4225/1‑136 GTGCTCACGGCCACCGCTGCCGATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGC < 1:4225/136‑1 TCACGGCCACCGCTGCCGATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCAC < 1:378244/150‑1 TCACGGCCACCGCTGCCGATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCAC > 1:929943/1‑150 ACGGCCACCGCTGCCGATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACCCTGTGGGAGCGGGCATGCCCGAGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAG > 2:1551765/1‑150 GATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGC < 2:491825/115‑1 GATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGC > 1:491825/1‑115 AAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGG < 2:1011396/109‑1 AAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGG > 1:1011396/1‑109 AAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGG > 2:492336/1‑83 AAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGG < 1:492336/83‑1 CCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGG > 1:1340305/1‑150 CCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCT > 1:1653703/1‑148 CCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCT < 2:1653703/148‑1 GCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAA > 1:1781198/1‑150 ATGCGGCGGTGAATCCACCATTGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTT > 1:148523/1‑102 ATGCGGCGGTGAATCCACCATTGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTT < 2:148523/102‑1 CGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCC < 2:1340305/150‑1 CACCATCGTATTCGCGGGCAAGCCCGCTCCTACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGAC > 2:1557829/1‑78 CACCATCGTATTCGCGGGCAAGCCCGCTCCTACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGAC < 1:1557829/78‑1 ATTCGCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAAA < 1:1732969/150‑1 GCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAAAGTCT > 2:370037/1‑150 GCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAAAGTCT > 1:1773447/1‑150 GCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGA > 1:308964/1‑142 GCGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGA < 2:308964/142‑1 CGGGCAAGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAAAGTCTT < 1:843472/150‑1 GGGCACGCCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAAAGTCTTC < 1:1883103/150‑1 CCCGCTCCCACATTTTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAAAGTCTTCGTTGCCC < 2:898675/150‑1 CCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTTCAGACGTG‑TAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAAAGTCTTCGTTGCCC < 1:19765/150‑1 CCCGCTCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAAAGTCTTCGTTGCCC < 2:269232/150‑1 TCCCACAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAAAGTCTTCGTTGCCCCGTGC > 2:78123/1‑150 ccgCAGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTA‑TGCCATGCACGTTTTGATCATCGGCAGCGGTGGCGGGGAGCACGCCCTGGCCTGGAAGGGCGTCCATGACGGACGCGTCGGGAAAGTCTTCGTTGCCCCGGGCAA > 2:574602/4‑150 AGTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAAAGTCTTCGTTGCCCCGGGCAACGCC < 1:557194/150‑1 CCAGGCCAGGGCGTGCTCACGGCCACCGCTGCCGATGATCAAAACTTTCATGTCAAAACCTCGATTCAAGTGATCCCGTGGCTTGCGCCGAACACTGTGGGAGCGGGCTTGCCCGCGAATGCGGCGGTGAATCCACCATCGTATTCGCGGGCAAGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5485339‑5485172‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggcaagcccgctcccacagTGTTCGGCGCAAGCCACGGGATCACTTGAATCGAGGTTT‑TGACATGAAAGTTTTGATCATCGGCAGCGGTGGCCGTGAGCACGCCCTGGCCTGGAAAGTCGCCCAGGACCCACGCGTCGAGAAAGTCTTCGTTGCCCCGGGCAACGCC > NC_002947/5485246‑5485393 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |