| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5527455 = | 77 (1.050) | 7 (0.100) | 7/236 | NT | 8.8% | coding (920/1134 nt) | PP_4860 | mannose‑6‑phosphate isomerase |
| ? | NC_002947 | 5527474 = | 71 (1.020) | coding (939/1134 nt) | PP_4860 | mannose‑6‑phosphate isomerase | |||||
TGGCATGTCATCCCTGCTCACCGCGCCGTCACCCCCTCGGCACTCATACCAGCCGGCGTCACGCAGGAACCGCGCTGAAAGGGCGCCCAACTGCCCCGCGAGCTTTGCTTCACTGCCTTCACGCAATGTAAGCGCCCGCAGGTACTCG‑GCCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5527609‑5527455‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAGGGATGACATGCCATCGACCACGCC > NC_002947/5527474‑5527620 TGGCATGTCATCCCTGCTCACCGCGCCGTCACCCCCTCGGCACTCATACCAGCCGGCGTCACGCAGGAACCGCGCTGAAAGGGCGCCCAACTGCCCCGCGAGCTTTGCTTCACTGCCTTCACGCAATGTAAGCGCCCGCAGGTACTCG‑GC < 2:98873/150‑1 GGCATGTCATCCCTGCTCACCGCGCCGTCCCCCTCTCGGCACTCACACCAGCCGGCGTCACGCAGGAACCGCGCTGAAAGGGCGCCCAACTGCCCCGCGAGCTTTGCTTCACTGCCTTCACGCAATGTAAGCGCCCGCAGGTACTCG‑GCC < 2:148837/150‑1 GGCATGTCATCCCTGCTCACCGCGCCGTCACCCCCTCGGCACTCATACCAGCCGGCGTCACGCAGGAACCGCGCTGAAAGGGCGCCCAACTGCCCCGCGAGCTTTGCTTCACTGCCTTCACGCAATGTAAGCGCCCGCAGGTACTCG‑GCC > 1:1124197/1‑150 TGTCATCCCTGCTCACCGCGCCGTCACCCCCTCGGCACTCATACCAGCCGGCGTCACGCAGGAACCGCGCTGAAAGGGCGCCCAACTGCCCCGCGAGCTTTGCTTCACTGCCTTCACGCAATGTAAGCGCCCCCAGGTACTCG‑GCCTGCG > 2:1267931/1‑150 TCATACCAGCCGGCGTCACGCAGGAACCGCGCTGAAAGGGCGCCCAACTGCCCCGCGAGCTTTGCTTCACTGCCTTCACGCAATGTAAGCGCCCGCAGG‑CCGAGTACCTGCGGGCGCTTACATTGCGTGAAGGC > 1:1646325/1‑134 TCATACCAGCCGGCGTCACGCAGGAACCGCGCTGAAAGGGCGCCCAACTGCCCCGCGAGCTTTGCTTCACTGCCTTCACGCAATGTAAGCGCCCGCAGG‑CCGAGTACCTGCGGGCGCTTACATTGCGTGAAGGC < 2:1646325/134‑1 TGAAAGGGCGCCCAACTGCCCCGCGAGCTTTGCTTCACTGCCTTCACGCAATGTAAGCGCCCGCAGG‑CCGAGTACCTGCGGGCGCTTACATTGC > 1:24456/1‑94 TGAAAGGGCGCCCAACTGCCCCGCGAGCTTTGCTTCACTGCCTTCACGCAATGTAAGCGCCCGCAGG‑CCGAGTACCTGCGGGCGCTTACATTGC < 2:24456/94‑1 CCGCAGGTACTCG‑GCCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAGGGATGAC > 1:964658/1‑150 CGCAGGTACTCG‑GCCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGG < 1:865877/135‑1 CGCAGGTACTCG‑GCCTGCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGG > 2:865877/1‑135 GCGGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAGGGATGACATGCCATCGACCACGCC > 2:669783/1‑150 TGGCATGTCATCCCTGCTCACCGCGCCGTCACCCCCTCGGCACTCATACCAGCCGGCGTCACGCAGGAACCGCGCTGAAAGGGCGCCCAACTGCCCCGCGAGCTTTGCTTCACTGCCTTCACGCAATGTAAGCGCCCGCAGGTACTCG‑GCCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5527609‑5527455‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgGGCGCTTACATTGCGTGAAGGCAGTGAAGCAAAGCTCGCGGGGCAGTTGGGCGCCCTTTCAGCGCGGTTCCTGCGTGACGCCGGCTGGTATGAGTGCCGAGGGGGTGACGGCGCGGTGAGCAGGGATGACATGCCATCGACCACGCC > NC_002947/5527474‑5527620 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |