New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5536020 =	76 (1.040)	4 (0.060)	6/234	NT	5.2%	coding (989/1209 nt)	pncB	nicotinate phosphoribosyltransferase
	?	NC_002947	5536037 =	74 (1.070)					coding (1006/1209 nt)	pncB	nicotinate phosphoribosyltransferase

GGTCTTGGCGGCTTCGTCAGAGATCTTGGCCACCGGCGCGCCGTTGCAGTCGGTCATTTTAAGCACGATGTTCATGGGGGCCACACCTGGGATGTCGCAGGTCAGGTTGGTGCCGATGCCAAAGCTGACGTTGATGCGTCCGCGCAGGGCGCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5536174‑5536020 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggaCGCATCAACGTCAGCTTTGGCATCGGCACCAACCTGACCTGCGACATCCCAGGTGTGGCCCCCATGAACATCGTGCTTAAAATGACCGACTGCAACGGCGCGCCGGTGGCCAAGATCTCTGACGAAGCCGCCAAGACCCAGTGCCGCGA  >  NC_002947/5536037‑5536185                                                                                                                                                                                                                                                                                                                  GGTCTTGGCGGCTTCGTCAGAGATCTTGGCCACCGGCGCGCCGTTGCAGTCGGTCATTTTAAGCACGATGTTCATGGGGGCCACACCTGGGATGTCGCAGGTCAGGTTGGTGCCGATGCCAAAGCTGACGTTGATGCGTCCGCGCAGGGC                                                                                                                                                            >  1:1931033/1‑150                 TCAGAGATCTTGGCCACCGGCGCGCCGTTGCAGTCGGTCATTTTAAGCACGATGTTCATGGGGGCCACACCTGGGATGTCGCAGGTCAGGTTGGTGCCGATGCCAAAGCTGACGTTGATGCGTCCGCGCCCTGCGCGGACGCA                                                                                                                                                   >  1:1820471/1‑143                 TCAGAGATCTTGGCCACCGGCGCGCCGTTGCAGTCGGTCATTTTAAGCACGATGTTCATGGGGGCCACACCTGGGATGTCGCAGGTCAGGTTGGTGCCGATGCCAAAGCTGACGTTGATGCGTCCGCGCCCTGCGCGGACGCA                                                                                                                                                   <  2:1820471/143‑1                                               CAGTCGGTCATTTTAAGCACGATGTTCATGGGGGCCACACCTGGGATGTCGCAGGTCAGGTTGGTGCCGATGCCAAAGCTGACGTTGATGCGTCCGCGCCCTGCGCGGACGCATCAACGTCAGCTTTGGCATCGGCA                                                                                                                           <  1:1465284/137‑1                                               CAGTCGGTCATTTTAAGCACGATGTTCATGGGGGCCACACCTGGGATGTCGCAGGTCAGGTTGGTGCCGATGCCAAAGCTGACGTTGATGCGTCCGCGCCCTGCGCGGACGCATCAACGTCAGCTTTGGCATCGGCA                                                                                                                           >  2:1465284/1‑137                                                                                                     GTCAGGTTGGTGCCGATGCCAAAGCTGACGTTGATGCGTCCGCGCCCTGCGCGGACGCATCAACGT                                                                                                                                            >  1:886493/1‑66                                                                                                     GTCAGGTTGGTGCCGATGCCAAAGCTGACGTTGATGCGTCCGCGCCCTGCGCGGACGCATCAACGT                                                                                                                                            <  2:886493/66‑1                                                                                                                                                         GGACGCATCAACGTCAGCTTTGGCATCGGCACCAACCTGACCTGCGACATCCCAGGTGTGGCCCCCATGAACATCGTGCTTAAAATGACCGACTGCAACGGCGCGCCGGTGGCCAAGATCTCTGACGAAGCCGCCAAGACCCAGTGCCGC    <  1:996809/150‑1                                                                                                                                                           ACGCATAAACGTCAGCTTTGGCATCGGCACCAACCTGACTTGCGACATCCCAGGTGTGGCCCCCATGAACATCGTGCTTAAAATGCCCGACTGCAACGGCGCGCCGGTGGCCAAAATCTCTGACGAAGCCGCCAAGACCCAGTGCCGCGA  <  1:1709642/150‑1                                                                                                                                                                                                                                                                                                                  GGTCTTGGCGGCTTCGTCAGAGATCTTGGCCACCGGCGCGCCGTTGCAGTCGGTCATTTTAAGCACGATGTTCATGGGGGCCACACCTGGGATGTCGCAGGTCAGGTTGGTGCCGATGCCAAAGCTGACGTTGATGCGTCCGCGCAGGGCGCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5536174‑5536020 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggaCGCATCAACGTCAGCTTTGGCATCGGCACCAACCTGACCTGCGACATCCCAGGTGTGGCCCCCATGAACATCGTGCTTAAAATGACCGACTGCAACGGCGCGCCGGTGGCCAAGATCTCTGACGAAGCCGCCAAGACCCAGTGCCGCGA  >  NC_002947/5536037‑5536185

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.