| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5599566 | 79 (1.080) | 5 (0.070) | 5/236 | NT | 6.4% | coding (3967/5418 nt) | PP_4924 | subtilase family serine protease |
| ? | NC_002947 | = 5599598 | 72 (1.040) | coding (3935/5418 nt) | PP_4924 | subtilase family serine protease | |||||
ACCTCAAGCTTCCACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5599412‑5599566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCACGCGCAGCGTACTGCTCGATCGCACAGGCAAGGCGCCGGGCTCTGGTGATGACGATCTGGGCGATTCGCGTTCAGGGGCGTTCAAATATGGGTTCATGTCGACCCATCAT < NC_002947/5599598‑5599450 ACCTCAAGCTTCCACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTG > 2:985530/1‑150 CCTCAAGCTTCCACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGCGCAGTACGCTGCGCGTGC < 1:1911533/150‑1 CCTCAAGCTTCCACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGC > 1:1571297/1‑150 CTCAAGCTTCCACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCC > 1:698941/1‑150 CTCAAGCTTCCACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCC > 2:643283/1‑150 CTCAAGCTTCCACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCC < 2:464216/150‑1 TCAAGCTTCCACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCG > 1:826067/1‑150 TCAAGCTTCCACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCG > 1:896159/1‑150 TCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCACG > 1:307604/1‑150 CGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCACGC < 2:307604/150‑1 AACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCACGCGCAGCGTACTGCTCGATCG < 1:634407/150‑1 AGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCACGCGCAGCGTACTGC > 1:1201579/1‑119 AGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCACGCGCAGCGTACTGC < 2:1201579/119‑1 CCGCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCACGCGCAGCGTACTGCTCGATCGCACAGGCAAGGCGCCGGGCTCTGGTGATGACGATCTGGGCGATTCGCGTTCAGGGGCGTTCAAATATGGGTTCATGTCGACCCA < 1:373228/150‑1 CGCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCACGCGCAGCGTACTGCTCGATCGCACAGGCAAGGCGCCGGGCTCTGGTGATGACGATCTGGGCGATTCGCGTTCAGGGGCGTTCAAATATGGGTTCATGTCGACCCAT > 2:698941/1‑150 GCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCACGCGCAGCGTACTGCTCGATCGCACCGGCAAGGCGCCGGGCTCTGGTGATGACGATCTGGGCGATTCGCGTTCAGGGGCGTTCAAATATGGGTTCATGTCGACCCATC > 1:1913626/1‑150 GCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCACGCGCAGCGTACTGCTCGATCGCACAGGCAAGGCGCCGG < 1:721195/81‑1 GCCTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCACGCGCAGCGTACTGCTCGATCGCACAGGCAAGGCGCCGG > 2:721195/1‑81 GCCTTGGCGACATGACGCTCACGCTGGTGTCGACTAGCGGCACGCGCAGCGTACTGCTCGATCGCACAGGCAAGGCGCCGGGCTCTGGTGATGACGATCTGGGCGATTCGCGTTCAGGGGCGTTCAAATATGGGTTCATGTCGACCCATC > 1:1424593/1‑150 CTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCACGCGCAGCGTACTGCTCGATCGCACAGGCAAGGCGCCGGGCTCTGGTGATGACGATCTGGGCGATTCGCGTTCAGGGGCGTTCAAATATGGGTTCATGTCGACCCATCAT > 1:1285579/1‑150 ACCTCAAGCTTCCACTCCCCAGCCGAGCGCTCTGCGCGATGATGGGTCGACATGAACCCATATTTGAACGCCCCTGAACGCGAATCGCCCAGATCGTCATCACCAGAGCCCGGCGCCTTGCCTGTGCGATCGAGCAGTACGCTGCGCGTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5599412‑5599566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccTTGGCGACATGACGCTCACGCTGGTGTCGCCTGGCGGCACGCGCAGCGTACTGCTCGATCGCACAGGCAAGGCGCCGGGCTCTGGTGATGACGATCTGGGCGATTCGCGTTCAGGGGCGTTCAAATATGGGTTCATGTCGACCCATCAT < NC_002947/5599598‑5599450 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |