| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5611616 | 58 (0.790) | 3 (0.040) | 3/230 | NT | 5.4% | coding (559/1176 nt) | PP_4931 | hypothetical protein |
| ? | NC_002947 | = 5611650 | 52 (0.770) | coding (593/1176 nt) | PP_4931 | hypothetical protein | |||||
ACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCTGGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5611459‑5611616‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcgttggGCACGGATTTCCCGGTCGTCCACGCGCAGGCCGACCAACGCATTACCTTCACGCAAGGGTTCGATGCGTTCACCTGCCAGCAAGGACTCGCCGGCCAGCTCGGCCAGGTTGGCCAGCAGGCTCGGGACATCGACCACCAGTTCC < NC_002947/5611650‑5611507 ACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCTGGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAA < 2:1625364/150‑1 GGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCTGGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGC > 1:1363742/1‑150 ACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCTGGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTT > 2:1086456/1‑150 CTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCTGGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTG < 1:1277132/150‑1 GCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCTGGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGT < 1:1664307/126‑1 GCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCTGGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGT > 2:1664307/1‑126 ACTGGTGGTCGATGTCCCGAGCCTGCTGGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAAT < 1:1652182/100‑1 ACTGGTGGTCGATGTCCCGAGCCTGCTGGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAAT > 2:1652182/1‑100 GGTGGTCGATGTCCCGAGCCTGCTCGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGGGCACGGATTTCCCGGTCGTCCACGCGCAGGCCGACCAACGCATTAC < 1:199500/150‑1 ATCGAACCCTTGCGTGAAGGTAATGCGTTGGGCACGGATTTCCCGGTCGTCCACGCGCAGG < 1:1754265/61‑1 ATCGAACCCTTGCGTGAAGGTAATGCGTTGGGCACGGATTTCCCGGTCGTCCACGCGCAGG > 2:1754265/1‑61 ATGCGTTGGGCACGGATTTCCCGGTCGTCCACGCGCAGGCCGACCAACGCATTACCTTCACGCAAGGGTTCGATGCGTTCACCTGCCAGCAAGGACTCGCCGGCCAGCTCGGCCAGGTTGGCCAGCAGGCTCGGGACATCGACCACCAGT < 1:1663693/150‑1 CGTTGGGCACGGATTTCCCGGTCGGCCACGCGCAGGCCGACCAACGTATTACCTTCACGCAAGGGTTCGATGCGTTCACCTGCCAGCAAGGACTCGCCGGCCAGCTCGGCCAGGTTGGCCAGCAGGCTCGGGACATCGACCACCAGTTCC < 2:748901/150‑1 ACCGGCACTGCAGGACCGCGCGTTCAAGGGCAAGGTGTACCGCCTGGCGGAACTGGTGGTCGATGTCCCGAGCCTGCTGGCCAACCTGGCCGAGCTGGCCGGCGAGTCCTTGCTGGCAGGTGAACGCATCGAACCCTTGCGTGAAGGTAATGCGTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5611459‑5611616‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcgttggGCACGGATTTCCCGGTCGTCCACGCGCAGGCCGACCAACGCATTACCTTCACGCAAGGGTTCGATGCGTTCACCTGCCAGCAAGGACTCGCCGGCCAGCTCGGCCAGGTTGGCCAGCAGGCTCGGGACATCGACCACCAGTTCC < NC_002947/5611650‑5611507 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |