New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5612940	71 (0.970)	4 (0.060)	4/236	NT	5.5%	coding (711/813 nt)	PP_4932	D‑arabinose 1‑dehydrogenase
	?	NC_002947	= 5612957	71 (1.020)					coding (728/813 nt)	PP_4932	D‑arabinose 1‑dehydrogenase

TGGTCACCTACAACCTCAACGAACAGGCAGAACGCCCGGTGCTGGACTACGCTGCCGAACACGGCAAGGCCATCCTGGTAAAAAAGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5612786‑5612940 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctgACGCCCGGGTGGGCGAACAGCAGCTCGAAGCTGGCCTGCACCGGGTCGACGCCCGGGGCCAGGCAGATATGCCCGCTCGCCAAGGCCTTTTTTACCAGGATGGCCTTGCCGTGTTCGGCAGCGTAGTCCAGCACCGGGCGTTCTGCCTG  <  NC_002947/5612957‑5612809                                                                                                                                                                                                                                                                                                                  TGGTCACCTACAACCTCAACGAACAGGCAGAACGCCCGGTGCTGGACTACGCTGCCGAACACGGCAAGGCCATCCTGGTAAAAAAGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGC                                                                                                                                                            <  2:1883386/150‑1    TCACCTACAACCTCAACGAACAGGCAGAACGCCCGGTGCTGGAGTACGCTGCCGAACACGGCAAGGCCATCCTGGTAAAAAAGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGC                                                                                                                                                         >  1:452347/1‑150    TCACCTACAACCTCAACGAACAGGCAGAACGCCCGGTGCTGGACTACGCTGCCGAACACGGCAAGGCCATCCTGGTAAAAAAGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGC                                                                                                                                                         >  1:222372/1‑150     CACCTACAACCTCAACGAACAGGCAGAACGCCCGGTGCTGGACTACGCTGCCGAACACGGCAAGGCCATCCTGGTAAAAAAGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCT                                                                                                                                                        >  1:370766/1‑150                                                                                                 GCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTGACGCCCGGGTGGGCGAACAGCAGCTCGAAG                                                                                                                         >  1:1338762/1‑89                                                                                                 GCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTGACGCCCGGGTGGGCGAACAGCAGCTCGAAG                                                                                                                         <  2:1338762/89‑1                                                                                                               CTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTGACGCCCGGGTGGGCGAACAGCAGCTC                                                                                                                             >  1:940974/1‑71                                                                                                               CTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTGACGCCCGGGTGGGCGAACAGCAGCTC                                                                                                                             <  2:940974/71‑1                                                                                                                                                      CTGCTGACGCCCGGGTGGGCGAACAGCAGCTCGAAGCTGGCCTGCACCGGGTCGACGCCCGGGGCCAGGCAGATATGCCCGCTCGCCAAGGCCTTTTTTACCAGGATGGCCTTGCCGTGTTCGGCAGCGTAGTCCAGCACCGGGCGTTCT       <  2:1782420/150‑1                                                                                                                                                       TGCTGACGCCCGGGTGGGCGAACAGCAGCTCGAAGCTGGCCTGCACCGGGTCGACGCCCGGGGCCAGGCAGATATGCCCGCTCGCCAAGGCCTTTTTTACCAGGATGGCCTTGCCGTGTTCGGCAGCGTAGTCCA                     <  1:1621952/135‑1                                                                                                                                                       TGCTGACGCCCGGGTGGGCGAACAGCAGCTCGAAGCTGGCCTGCACCGGGTCGACGCCCGGGGCCAGGCAGATATGCCCGCTCGCCAAGGCCTTTTTTACCAGGATGGCCTTGCCGTGTTCGGCAGCGTAGTCCA                     >  2:1621952/1‑135                                                                                                                                                          TGACGCCCGGGTGGGCGAACAGCAGCTCGAAGCTGGCCTGCACCGGGTCGACGCCCGGGGCCAGGCAGATATGCCCGCTCGCCAAGGCCTTTTTTACCAGGATGGCCTTGCCGTGTTCGGCAGCGTAGTCCAGCACCGGGCGTTCTGCCT   >  1:1533564/1‑150                                                                                                                                                           GACGCCCGGGTGGGCGAACAGCAGCTCGAAGCTGGCCTGCACCGGGTCGACGCCCGGGGCCAGGCAGATATGCCCGCTCGCCAAGGCCTTTTTTACCAGGATGGCCTTGCCGTGTTCGGCAGCGTAGTCCAGCACCGGGCGTTCTGCCTG  >  2:513769/1‑150                                                                                                                                                                                                                                                                                                                  TGGTCACCTACAACCTCAACGAACAGGCAGAACGCCCGGTGCTGGACTACGCTGCCGAACACGGCAAGGCCATCCTGGTAAAAAAGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5612786‑5612940 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctgACGCCCGGGTGGGCGAACAGCAGCTCGAAGCTGGCCTGCACCGGGTCGACGCCCGGGGCCAGGCAGATATGCCCGCTCGCCAAGGCCTTTTTTACCAGGATGGCCTTGCCGTGTTCGGCAGCGTAGTCCAGCACCGGGCGTTCTGCCTG  <  NC_002947/5612957‑5612809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.