| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5743392 = | 89 (1.220) | 11 (0.170) | 9/222 | NT | 12.7% | intergenic (‑169/+78) | fbp/glgP | class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase |
| ? | NC_002947 | 5743446 = | 72 (1.100) | intergenic (‑223/+24) | fbp/glgP | class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase | |||||
TTGAACACGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5743553‑5743392‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCAC > NC_002947/5743446‑5743590 TTGAACACGGCACGGATGGGCTGGTTCTCGTCGGACGGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCACGCAAAGCGTG‑CGCGCAAGCGTCAAGGCTTGCGCTGTA > 2:154364/1‑150TTGAACACGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTA < 2:1268157/150‑1 AACACGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCT > 2:546886/1‑150 AACACGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCT > 2:432113/1‑150 AACACGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCT > 1:1720794/1‑150 AACACGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCTCCCACAG‑GGGTCTAGCAAGCTTCAAGCCTTCCGCTGTACCT > 2:1222153/1‑150 aaGGCACGGATGGGCTGGTTCTCGTTGGACCGCACCATTCGCGCATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTG < 2:341608/148‑1 aGGCACGGATGGGGCGGTTCTCGTCGCACCACACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGG < 2:596663/149‑1 CGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGG < 2:1230324/150‑1 CACGGATGGGCTGGCTTTCATCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAG < 2:1635914/150‑1 CGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGC > 1:1496946/1‑114 CGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGC < 2:1496946/114‑1 GCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAA > 1:1526918/1‑85 GCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAA < 2:1526918/85‑1 CCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGC < 1:1745874/112‑1 CCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGAGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGC > 2:1745874/1‑112 CCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCG > 2:1127557/1‑150 CCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCG > 2:1738682/1‑150 AG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTT < 1:1738682/150‑1 TCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCT < 1:1741518/78‑1 TCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCT > 2:1741518/1‑78 TCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGC < 2:598644/100‑1 TCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGC > 1:598644/1‑100 TGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACCTCAATCCAATGCCTTCCAGATCTAGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGC > 1:1293531/1‑135 TGTACCTGTGGGAGCGAGCGCGCCCGCGAATGGACACACCTCAATCCAATGCCTTCCAGATCTAGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGC < 2:1293531/135‑1 CCTGTGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGT < 2:1811439/150‑1 TGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGT < 2:1620595/112‑1 TGGGAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGT > 1:1620595/1‑112 GAGCGGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCAC < 2:1585479/150‑1 TTGAACACGGCACGGATGGGCTGGTTCTCGTCGGACCGCACCATTCGCGAATATGCCACCGAGATCTGGAAGGCATTGGATTGAGGTGAGGCCGTTCGCGGGCACGCCCGCTCCCACAG‑GTGTCTCGCAAGCTTCAAGGCTTGCGCTGTACCTGTGGGAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5743553‑5743392‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggagcgGGCGTGCCCGCGAACGGCCTCACCTCAATCCAATGCCTTCCAGATCTCGGTGGCATATTCGCGAATGGTGCGGTCCGACGAGAACCAGCCCATCCGTGCCGTGTTCAATACCGCCTTGCGCCACCACTCCTGCGGTGTGTGCCAC > NC_002947/5743446‑5743590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |