| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5765435 = | 92 (1.260) | 5 (0.070) | 5/234 | NT | 5.5% | coding (35/768 nt) | PP_5059 | hypothetical protein |
| ? | NC_002947 | 5765465 = | 84 (1.220) | coding (65/768 nt) | PP_5059 | hypothetical protein | |||||
TCGGTGGCATGCGGGGTGTCGGGCATGATCGCCATGGTCACCGGCCCAGGCAGGGCCAGGGTACGGCTGTCGCGCTCTGGGCTCTGGCCCAGGTCGTCGATGATGATGCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5765588‑5765435‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggccaACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGACTTTGCACGCCAGGCGCACAAGGCC > NC_002947/5765465‑5765613 TCGGTGGCATGCGGGGTGTCGGGCATGATCGCCATGGTCACCGGCCCAGGCAGGGCCAGGGTACGGCTGTCGCGCTCTGGGCTCTGGCCCAGGTCGTCGATGATGATGCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCG > 1:1146036/1‑150TCGGTGGCATGCGGGGTGTCGGGCATGATCGCCATGGTCACCGGCCCAGGCAGGGCCAGGGTACGGCTGTCGCGCTCTGGGCTCTGGCCCAGGTCGTCGATGATGATGCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCG < 1:1629915/150‑1TCGGTGGCATGCGGGGTGTCGGGCATGATCGCCATGGTCACCGGCCCAGGCAGGGCCAGGGTACGGCTGTCGCGCTCTGGGCTCTGGCCCAGGTCGTCGATGATGATGCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCG < 1:1084145/150‑1 GTGGCATGCGGGGTGTCGGGCATGATCGCCATGGTCACCGGCCCAGGCAGGGCCAGGGTACGGCTGTCGCGCTCTGGGCTCTGGCCCAGGTCGTCGATGATGATGCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGGCC > 2:1594778/1‑150 GTGGCATGCGGGGTGTCGGGCATGATCGCCATGGTCACCGGCCCAGGCAGGGCCAGGGTACGGCTGTCGCGCTCTGGGCTCTGGCCCAGGTCGTCGATGATGATGCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGGCC > 2:200463/1‑150 ACCGGCCCAGGCAGGGCCAGGGTACGGCTGTCGCGCTCTGGGCTCTGGCCCAGGTCGTCGATGATGATGCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGG < 2:393847/112‑1 ACCGGCCCAGGCAGGGCCAGGGTACGGCTGTCGCGCTCTGGGCTCTGGCCCAGGTCGTCGATGATGATGCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGG > 1:393847/1‑112 ctGGCCCAGGCAGGGCCAGGGTACGGCTGTCGCGCTCTGGGCTCTGGCCCAGGTCGTCGATGATGATGCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGGC < 1:534117/110‑1 ctGGCCCAGGCAGGGCCAGGGTACGGCTGTCGCGCTCTGGGCTCTGGCCCAGGTCGTCGATGATGATGCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGGC > 2:534117/3‑112 TCTGGGCTCTGGCCCAGGTCGTCGATGATGATGCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGG > 1:1609013/1‑76 TCTGGGCTCTGGCCCAGGTCGTCGATGATGATGCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGG < 2:1609013/76‑1 GCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGC < 1:1737922/117‑1 GCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGC > 2:1737922/1‑117 CTTGTTGGCCGGTGCCGCTTGCGCGATTCCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATG < 1:1406713/136‑1 CTTGTTGGCCGGTGCCGCTTGCGCGATTCCGGCCAACAAGGCCGACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATG > 2:1406713/1‑136 TTGTTGGCCGGTGTCGCTTGCGCGATTCCGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCAT > 1:203620/1‑150 CGGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGACTTTGCACGCCAGGCGCACA > 1:322732/1‑150 GGCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGACTTTGCACGCCAGGCGCACAA > 2:1229269/1‑150 GCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGACTTTGCACGCCAGGCGCACAAG < 2:1094420/150‑1 GCCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGACTTTGCACGCCAGGCGCACAAG > 2:1083879/1‑150 CCAACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGACTTTGCACGCCAGGCGCACAAGG > 2:768931/1‑150 AACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGACTTTGCACGCCAGGCTCACAAGGCC > 2:1504323/1‑150 AACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGACTTTGCACGACAGGCGCACAAGGCC > 2:800697/1‑150 AACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCACAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGACTTTGCACGCCAGGCGCACAAGGCC < 1:768931/150‑1 TCGGTGGCATGCGGGGTGTCGGGCATGATCGCCATGGTCACCGGCCCAGGCAGGGCCAGGGTACGGCTGTCGCGCTCTGGGCTCTGGCCCAGGTCGTCGATGATGATGCTCATGTAGGCCTTGTTGGCCGGTGCCGCTTGCGCGATTCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5765588‑5765435‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggccaACAAGGCCTACATGAGCATCATCATCGACGACCTGGGCCAGAGCCCAGAGCGCGACAGCCGTACCCTGGCCCTGCCTGGGCCGGTGACCATGGCGATCATGCCCGACACCCCGCATGCCACCGACTTTGCACGCCAGGCGCACAAGGCC > NC_002947/5765465‑5765613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |