| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5810279 = | 73 (1.000) | 9 (0.130) | 8/236 | NT | 11.9% | coding (11/768 nt) | PP_5086 | nuclease |
| ? | NC_002947 | 5810302 = | 64 (0.920) | intergenic (‑13/+44) | PP_5086/rpmE | nuclease/50S ribosomal protein L31 | |||||
ACCGGTAAGCAGAAAGTTCTGGACACCGGTGGTCGCGTACAGAAGTTCGCCGATCGCTTCGGCATGTTCGGTGCCAAGAAGTAATCATGCGCATGGCGAATCCTTCGGGTTTCGCATTGTTGCTGAAGAAGGCGTCCCTTGTGGGCGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5810429‑5810279‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccttCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTTGGCACCGAACATGCCGAAGCGATCGGCGAACTTCTGTACGCGACCACCGGTGTCCAGAACTTTCTGCTTACCGGTGTAGAACGGGTGGCACAGGTT > NC_002947/5810302‑5810450 ACCGGTAAGCAGAAAGTTCTGGACACCGGTGGTCGCGTACAGAAGTTCGCCGATCGCTTCGGCATGTTCGGTGCCAAGAAGTAATCATGCGCATGGCGAATCCTTCGGGTTTCGCATTGTTGCTGAAGAAGGCGTCCCTTGTGGGCGCCT > 2:639776/1‑150 TGAAGAAGGCGTCCCTTGTGGGCGCCTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GAT < 2:761714/73‑1 TGAAGAAGGCGTCCCTTGTGGGCGCCTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GAT > 1:761714/1‑73 GAAGGCGTCCCTTGTGGGCGCCTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTTGGAACCGAACATGCCGAAGCGATCGGCGAACTTCTGTACGCGACCACCGGTGTCCAGAACTTTCTGCTTACCG > 2:857033/1‑150 GAAGGCGTCCCTTGTGGGCGCCTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTT < 1:1251009/77‑1 GAAGGCGTCCCTTGTGGGCGCCTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTT > 2:1251009/1‑77 AAGGCGTCCCTTGTGGGCGCCTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTTGGCACCGAACATGCCGAAG < 1:1729300/95‑1 AAGGCGTCCCTTGTGGGCGCCTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTTGGCACCGAACATGCCGAAG > 2:1729300/1‑95 GGCGTCCCTTGTGGGCGCCTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTTGGCACCGAACATGCCGAAGCGATCGGCGAACTTCTGTACGCGACCACCGGTGTCCAGAACTTTCTG < 1:1275726/140‑1 GGCGTCCCTTGTGGGCGCCTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTTGGCACCGAACATGCCGAAGCGATCGGCGAACTTCTGTACGCGACCACCGGTGTCCAGAACTTTCTG > 2:1275726/1‑140 GCCTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTTGGCACCGAACATGCCGAAGCGATCGGCGAACTTCTGTACGCGACC < 2:1163345/103‑1 GCCTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTTGGCACCGAACATGCCGAAGCGATCGGCGAACTTCTGTACGCGACC > 1:1163345/1‑103 CTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTTGGCACCGAACATGCCGAAGCGATCGGCGAACTTCTGTACGCGACCACCGGTGTCCAGAACTTTCTGCTTACCGGTGTAGAACGGGTGGCACAGG < 1:1872488/150‑1 CTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTTGGCACCGAACATGCCGAAGCGATCGGCGAACTTCTGTACGCGACCACCGGTGTCCAGAA < 2:1212678/115‑1 CTTCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTTGGCACCGAACATGCCGAAGCGATCGGCGAACTTCTGTACGCGACCACCGGTGTCCAGAA > 1:1212678/1‑115 CTTCTTCAGCAACAATGCGAAACCCGAAGGATTCACCATGCGCATCCGCTACAT‑TTGGCACCGAACATGCCTAGGCGATCGGCGAACTTCTGTACGCGACCACCGGTGTCCAGAACTTTCTGCTTACCGGTGTAGAACGGGTGGCACAGG > 1:338506/1‑150 TTCTTCAGCAACAAGGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTTGGCACCGAACATGCCGAAGCGATCGGCGAACTTCTGTACGCGACCACCGGTGTCCAGAACTTTCTGCTTACCGGTGTAGAACGGGTGGCACAGGT < 1:153559/150‑1 TCTTCAGCAAAAACGCGAAACACGAAGGATTAGCCATACGCAT‑GATTACTTCTTGGCACCGAAAATGCCGAAGCGATCTGCTAAATTCTGTAGGCGACCACCGGTGTCCAGAACTTTCTGCTTACCGGTGTAGAACGGGTGGCACAGGTT < 2:329456/150‑1 ACCGGTAAGCAGAAAGTTCTGGACACCGGTGGTCGCGTACAGAAGTTCGCCGATCGCTTCGGCATGTTCGGTGCCAAGAAGTAATCATGCGCATGGCGAATCCTTCGGGTTTCGCATTGTTGCTGAAGAAGGCGTCCCTTGTGGGCGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5810429‑5810279‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccttCTTCAGCAACAATGCGAAACCCGAAGGATTCGCCATGCGCAT‑GATTACTTCTTGGCACCGAACATGCCGAAGCGATCGGCGAACTTCTGTACGCGACCACCGGTGTCCAGAACTTTCTGCTTACCGGTGTAGAACGGGTGGCACAGGTT > NC_002947/5810302‑5810450 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |