New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5826466 =	52 (0.710)	6 (0.090)	6/236	NT	11.0%	coding (218/279 nt)	PP_5105	sulfur carrier protein ThiS
	?	NC_002947	5826488 =	48 (0.690)					coding (196/279 nt)	PP_5105	sulfur carrier protein ThiS

TGGTGGCCGTGCGCATGCGCATTAAATTGAACGGTGAACCTTACGAACTGCCTGCCGGCGAAAGCGTTGCAGCCCTGCTGGCGCGCCTGGAGCTGACCGGGCGCCGTGTTGCAGTGGAACTGAACCTGGATATCGTGCCGCGTAGCCAGCACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5826619‑5826466 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacgaTATCCAGGTTCAGTTCCACTGCAACACGGCGCCCGGTCAGCTCCAGGCGCGCCAGCAGGGCTGCAACGCTTTCGCCGGCAGGCAGTTCGTAAGGTTCACCGTTCAATTTAATGCGCATGCGCACGGCCACCATTGTTCTTTGGGGCCA  >  NC_002947/5826488‑5826635                                                                                                                                                                                                                                                                                                                TGGTGGCCGTGCGCATGCGCATTAAATTGAACGGTGAACCTTACGAACTGCCTGCCGGCGAAAGCGTTGCAGCCCTGCTGGCGCGCCTGGAGCTGACCGGGCGCCGTGTTGCAGTGGAACTGAACCTGGATATCGTGCCGTGTAGCCAGC                                                                                                                                                          >  1:289606/1‑150   GTGGCCGTGCGCATGCGCATTAAATTGAACGGTGAACCTTACGAACTGCCTGCCGGCGAAAGCGTTGCAGCCCTGCTGGCGCGCCTGGAGCTGACCGGGCGCCGTGTTGCAGTGGAACTGAACCTGGATATCGTGCCGCGTAGCCAGCAC                                                                                                                                                        <  2:535187/150‑1    TGGCCGTGCGCATGCGCATTAAATTGAACGGTGAACCTTACGAACTGCCTACCTGCGAAAGCGTTGCAGCCCTGCTGGCGCGCCTGGAGCTGACCGGGCGCCGTGTTGCAGTGGAACTGAACCTGGATATCGTGCCGCGTAGCCAGCACG                                                                                                                                                       >  1:1319669/1‑150     GGCCGTGCGCAGCCGAATTAAATTGACCGGTGAACCTTACGAACTGCCTGCCGGCGAAAGCGTTGCAGCCCTGCTGGCGCGCCTGGAGCTGACCGGGCGCCGTGTTGCAGTGGAACTGAACCTGGATATCGTGCCGCGTAGCCAGCACGA                                                                                                                                                      <  1:554101/150‑1         GTGCGCATGCGCATTAAATTGAACGGTGAACCTTACGAACTGCCTGCCGGCGAAAGCGTTGCAGCCCTGCTGGCGCGCCTGGAGCTGACCGGGCGCCGTGTTGCAGTGGAACTGAACCTGGATATCGTGCCGCGTAGCCAGCAC                                                                                                                                                        <  1:177366/144‑1         GTGCGCATGCGCATTAAATTGAACGGTGAACCTTACGAACTGCCTGCCGGCGAAAGCGTTGCAGCCCTGCTGGCGCGCCTGGAGCTGACCGGGCGCCGTGTTGCAGTGGAACTGAACCTGGATATCGTGCCGCGTAGCCAGCAC                                                                                                                                                        >  2:177366/1‑144                         AATTGAACGGTGAACCTTACGAACTGCCTGCCGGCGAAAGCGTTGCAGCCCTGCTGGCGCGCCTGGAGCTGACCGGGCGCCGTGTTGCAGTGGAACTGAACCTGGATGTCGTGCTGGCTACGCGGCACGATATCCAGGTTCAGTTCCACT                                                                                                                                  <  1:134161/150‑1                                                                                              TGACCGGGCGCCGTGTTGCAGTGGAACTGAACCTGGATATCGTGCCGCGTAGCCAGCAC                                                                                                                                                        >  2:829784/1‑59                                                                                              TGACCGGGCGCCGTGTTGCAGTGGAACTGAACCTGGATATCGTGCCGCGTAGCCAGCAC                                                                                                                                                        <  1:829784/59‑1                                                                                                                             CCTGGATATCGTGCCGCGTAGCCAGCACGATATCCAGGTTCAGTTCCACTGCAACACGGCGCCCGGTCAGCTCCAG                                                                                                        >  1:257177/1‑76                                                                                                                             CCTGGATATCGTGCCGCGTAGCCAGCACGATATCCAGGTTCAGTTCCACTGCAACACGGCGCCCGGTCAGCTCCAG                                                                                                        <  2:257177/76‑1                                                                                                                              CTGGATATCGTGCCGCGTAGCCAGCACGATATCCAGGTTCAGTTCCACTGCAACACGGCGCCCGGTCAGCTCCAGGCGC                                                                                                    <  1:682419/79‑1                                                                                                                              CTGGATATCGTGCCGCGTAGCCAGCACGATATCCAGGTTCAGTTCCACTGCAACACGGCGCCCGGTCAGCTCCAGGCGC                                                                                                    >  2:682419/1‑79                                                                                                                                        TGCCGCGTAGCCAGCACGATATCCAGGTTCAGTTCCACTGCAACACGGCGCCCGGTCAGCTCCAGGCGCGCCAGCAGGGCTGCAACGCTTTCGCCGGCAGGCAGTTCGTAAGGTTCACCGTTCAATTTAATGCGCATGCGCACGGCCACC                   >  2:1309420/1‑150                                                                                                                                                     GCACGATATCCAGGTTCAGTTCCACTGCAACACGGCGCCCGGTCAGCTCCAGGCGCGCCAGCAGGGCTGCAACGCTTTCGCCGGCAGGCAGTTCGTAAGGTTCACC                                                  >  1:242507/1‑106                                                                                                                                                     GCACGATATCCAGGTTCAGTTCCACTGCAACACGGCGCCCGGTCAGCTCCAGGCGCGCCAGCAGGGCTGCAACGCTTTCGCCGGCAGGCAGTTCGTAAGGTTCACC                                                  <  2:242507/106‑1                                                                                                                                                         GATATCCAGGTTCAGTTCCACTGCAACACGGCGCCCGGTCAGCTCCAGGCGCGCCAGCAGGGCTGCAACGCTTTCGCCGGCAGGCAGTTCGTAAGGTTCACCGTTCAATTTAATGCGCATGCGCACGGCCACCATTGTTCTTTGGGGCCA  >  2:1813644/1‑150                                                                                                                                                         GATATCCAGGTTCAGTTCCACTGCAACACGGCGCCCGGTCAGCTCCAGGCGCGCCAGCAGGGCTGCAACGCTTTCGCCGGCAGGCAGTTCGTAAGGTTCACCGTTCAATTTAATGCGCATGCGCACGGCCACCATTGTTCTTTGGGGCCA  >  1:1498316/1‑150                                                                                                                                                         GATATCCAGGTTCAGTTCCACTGCAACACGGCGCCCGGTCAGCTCCAGGCGCGCCAGCAGGGCTGCAACGCTTTCGCCGGCAGGCAGTTCGTAAGGTTCACCGTTCAATTTAATGCGCATGCGCACGGCCACCATTGTTCTTTGGGGCCA  <  1:1309420/150‑1                                                                                                                                                                                                                                                                                                                TGGTGGCCGTGCGCATGCGCATTAAATTGAACGGTGAACCTTACGAACTGCCTGCCGGCGAAAGCGTTGCAGCCCTGCTGGCGCGCCTGGAGCTGACCGGGCGCCGTGTTGCAGTGGAACTGAACCTGGATATCGTGCCGCGTAGCCAGCACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5826619‑5826466 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacgaTATCCAGGTTCAGTTCCACTGCAACACGGCGCCCGGTCAGCTCCAGGCGCGCCAGCAGGGCTGCAACGCTTTCGCCGGCAGGCAGTTCGTAAGGTTCACCGTTCAATTTAATGCGCATGCGCACGGCCACCATTGTTCTTTGGGGCCA  >  NC_002947/5826488‑5826635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.