| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5856331 | 73 (1.000) | 6 (0.090) | 6/230 | NT | 8.1% | coding (202/1392 nt) | PP_5133 | membrane protein |
| ? | NC_002947 | = 5856341 | 69 (1.020) | coding (212/1392 nt) | PP_5133 | membrane protein | |||||
GCTCACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5856174‑5856331‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccctgcTTCCAATGG‑CGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGCAG < NC_002947/5856341‑5856193 GCTCACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGG > 1:1542021/1‑150 CACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGC > 1:702809/1‑150 ACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCC > 1:213328/1‑150 CCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCC < 2:1091262/150‑1 GAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTG > 1:464867/1‑150 AAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGC < 2:237710/150‑1 AAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGC < 1:1367163/150‑1 TGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGCTTCCAATGG‑CGCAGGGCGC > 1:1500823/1‑133 TGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGCTTCCAATGG‑CGCAGGGCGC < 2:1500823/133‑1 GCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGCTTCCAATGG‑CGCAGGGCGCCG > 2:845176/1‑64 GCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGCTTCCAATGG‑CGCAGGGCGCCG < 1:845176/64‑1 GATGACATGACCGGCGCCCTGC‑GCCATTGGAAGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTG < 1:1548496/94‑1 GATGACATGACCGGCGCCCTGC‑GCCATTGGAAGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTG > 2:1548496/1‑94 GCGCCCTGCTTCCAATGG‑CGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCA > 2:1300864/1‑93 GCGCCCTGCTTCCAATGG‑CGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCA < 1:1300864/93‑1 GCCCTGCTTCCAATGG‑CGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTC < 2:1011119/150‑1 GCCCTGCTTCCAATGG‑CGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTC < 1:1688464/150‑1 CCTGCTTGCAATGG‑CGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCat < 2:678776/120‑3 CCTGCTTCCAATGG‑CGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCT > 1:678776/1‑120 CCTGCTTCCAATGG‑CGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGACGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCAGGTTCTTCGC > 1:427165/1‑150 TGCTTCCAATGG‑CGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGC > 2:1542021/1‑150 CTTCCAATGG‑CGGAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGCAG < 1:1050053/150‑1 GCTCACCGAAGCGGTACGCCTGCGCGAAGAACATGCCGGCCCGCTGGAAGACCAGGAAGCCAACCGCCACGCCCGCCAGCTAGGTGGCGACCTGGCCACGCGCATCGAAACACGTGCGCTGTTCCTGGCCGAGCGCGATGACATGACCGGCGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5856174‑5856331‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccctgcTTCCAATGG‑CGCAGGGCGCCGGTCATGTCATCGCGCTCGGCCAGGAACAGCGCACGTGTTTCGATGCGCGTGGCCAGGTCGCCACCTAGCTGGCGGGCGTGGCGGTTGGCTTCCTGGTCTTCCAGCGGGCCGGCATGTTCTTCGCGCAG < NC_002947/5856341‑5856193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |