New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5862975 | 75 (1.030) | 4 (0.060) | 4/228 | NT | 5.4% | intergenic (‑131/+100) | fbpC/PP_5138 | ABC transporter ATP‑binding protein/LysR family transcriptional regulator |
? | NC_002947 | = 5863049 | 72 (1.070) | intergenic (‑205/+26) | fbpC/PP_5138 | ABC transporter ATP‑binding protein/LysR family transcriptional regulator |
TCTGTGCGCCGGGGGTGGTGTGGTTCATGGCATGGCCTCATCGAAGAGATGGGGCCATGCTAGGCAGGCTGTGCGAAGGTTCTGTGGCTTTAAGGCAAAAGCCGGTGATAGTGGTATAGGTAGATTTAGTAGTGGCCTGTACCGGCCTCTTCGCGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5862817‑5862975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtaGACCCGCTCCTGCATTTCTGCGTACATGCATGCCTGCATTTCTGCGAACACGCATTCCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCCACTACTAAATCTACCTATACCACTATCACCGGCTTTTGCCTTAAA < NC_002947/5863049‑5862905 TCTGTGCGCCGGGGGTGGTGTGGTTCATGGCATGGCCTCATCGAAGAGATGGGGCCATGCTAGGCAGGCTGTGCGAAGGTTCTGTGGCTTTAAGGCAAAAGCCGGTGATAGTGGTATAGGTAGATTTAGTAGTGGCCTGTACCGGCCTCT > 1:1824528/1‑150 CGCCGGGGGTGGTGTGGTTCATGGCATGGCCTCATCGAAGAGATGGGGCCATGCTAGGCAGGCTGTGCGAAGGTTCTGTGGCTTTAAGGCAAAAGCCGGTGATAGTGGTATAGGTAGATTTAGTAGTGGCCTGTACCGGCCTCTTCGCGG < 1:1534038/150‑1 CGCCGGGGGTGGTGTGGTTCATGGCATGGCCTCATCGAAGAGATGGGGCCATGCTAGGCAGGCTGTGCGAAGGTTCTGTGGCTTTAAGGCAAAAGCCGGTGATAGTGGTATAGGTAGATTTAGTAGTGGCCTGTACCGGCCTCTTCGCGG < 2:296289/150‑1 TTCATGGCATGGCCTCATCGAAGAGATGGGGCCATGCTAGGCAGGCTGTGCGAAGGTTCTGTGGCTTTAAGGCAAAAGCCGGTGATAGTGGTATAGGTAGATTTAGTAGTGGCCTGTACCGGCCTCTTCGCGG < 2:1009176/133‑1 TTCATGGCATGGCCTCATCGAAGAGATGGGGCCATGCTAGGCAGACTGTGTGAAGGTTCTGTGGCTTTAAGGCAAAAGCCGGTGATAGTGGTATAGGTAGATTTAGTAGTGGCCTGTACCGGCCTCTTCGCGG > 1:1009176/1‑133 CATGCTAGGCAGGCTGTGCGAAGGTTCTGTGGCTTTAAGGCAAAAGCCGGTGATAGTGGTATAGGTAGATTTAGTAGTGGCCTGTACCGGCCTCTTCGCGGGTAGACCCGCTCCTGCATTTCTGCGTACATGCATGCCTGCATTTCTGCG > 1:1260316/1‑150 GGCAAAAGCCGGTGATAGTGGTATAGGTAGATTTAGTAGTGGCCTGTACCGGCCTCTTCGCGGGTAGACCCGCTCCTGCATTTCTGCGTACATGCATGCCTGCATTTCTGCGAACACGCATTCCGTTGTAGGAGCGGGTTTACCCGCGAA < 2:1260316/150‑1 GGCAAAAGCCGGTGATAGTGGTATAGGTAGATTTAGTAGTGGCCTGTACCGGCCTCTTCGCGGGTAGACCCGCTCCTGCATTTCTGCGTACATGCATGCCTGCATTTCTGCGAACACGCATTCCGTTGTAGGAGCGGGTTTACCCG < 1:1273332/146‑1 GGCAAAAGCCGGTGATAGTGGTATAGGTAGATTTAGTAGTGGCCTGTACCGGCCTCTTCGCGGGTAGACCCGCTCCTGCATTTCTGCGTACATGCATGCCTGCATTTCTGCGAACACGCATTCCGTTGTAGGAGCGGGTTTACCCG > 2:1273332/1‑146 TCGCGGGTAGACCCGCTCCTGCATTTCTGCGTACATGCATGCCTGCATTTCTGCGAACACGCATTCCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCCACTACTAAATCTACCTATACCACTATCACCGGCTTTTGCCT < 2:1685972/150‑1 TCGCGGGTAGACCCGCTCCTGCATTTCTGCGTACAGGCATGTCTGCATTTCTGCGAACACGCATTCCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCCACTACTAAATCTACCTATACCACTATCACCGGCTTTTGCCT < 1:129808/150‑1 GGGTAGACCCGTTGCTGCATTTCTGCGTACATGCATGCCGGCATTTCTGCGAACACGCATTCCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCCACTACTAAATCTACCTATACCACTATCACCGGCTTTTGCCTTAAA < 1:1095075/150‑1 GGGTAGACCCGCTCCTGCATTTCTGCGTACATGCATGCCTGCATTTCTGCGAACACGCATTCCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCCACTACTAAATCTACCTATACCACTATCACCGGCTTTTGCCTTAAA > 1:870702/1‑150 GGGTAGACCCGCTCCTGCATTTCTGCGTACATGCATGCCTGCATTTCTGCGAACACGCATTCCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCCACTACTAAATCTACCTATACCACTATCACCGGCTTTTGCCTTAAA < 2:1750815/150‑1 GGGTAGACCCGCTCCTGCATTTCTGCGTACATGCATGCCTGCATTTCTGCGAACACGCATTCCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCCACTACTAAATCTACCTATACCACTATCACCGGCTTTTGCCTTAAA < 2:630426/150‑1 TCTGTGCGCCGGGGGTGGTGTGGTTCATGGCATGGCCTCATCGAAGAGATGGGGCCATGCTAGGCAGGCTGTGCGAAGGTTCTGTGGCTTTAAGGCAAAAGCCGGTGATAGTGGTATAGGTAGATTTAGTAGTGGCCTGTACCGGCCTCTTCGCGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5862817‑5862975 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtaGACCCGCTCCTGCATTTCTGCGTACATGCATGCCTGCATTTCTGCGAACACGCATTCCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCCACTACTAAATCTACCTATACCACTATCACCGGCTTTTGCCTTAAA < NC_002947/5863049‑5862905 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |