| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5940017 = | 78 (1.070) | 8 (0.110) | 8/240 | NT | 9.9% | coding (2522/2721 nt) | rbbA | ribosome‑associated ATPase |
| ? | NC_002947 | 5940046 = | 70 (0.990) | coding (2551/2721 nt) | rbbA | ribosome‑associated ATPase | |||||
CGGCAAAGAAGCTCAGCAGGATCAGGCACTGCGGCCACAACTCGCGCAGGCCTAAGGCCTTGGTGAAGGTGCCGACTGCGATGTCGAGGAAGTAGCCCGCCGGGAACAACTGGCCCATCACCGCTGCCGCGC‑CGTC‑CAGCGACGAGCGTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5940169‑5940017‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaGCGGTGATGGGCCAGTTGTTCCCGGCGGGCTACTTCCTCGACATCGCAGTCGGCACCTTCACCAAGGCCTTAGGCCTGCGCGAGTTGTGGCCGCAGTGCCTGATCCTGCTGAGCTTCTTTGCCGCGTTCACCGGCCTGAGCCTGGCAA > NC_002947/5940046‑5940193 CGGCAAAGAAGCTCAGCAGGATCAGGCACTGCGGCCACAACTCGCGCAGGCCTAAGGCCTTGGTGAAGGTGCCGACTGCGATGTCGAGGAAGTAGCCCGCCGGGAACAACTGGCCCATCACCGCTGCCGCGC‑CGTC‑CAGCGACGAGCGTG < 1:1189098/150‑1 AGCAGGATCAGGCACTGCGGCCACAACTCGCGCAGGCCTAAGGCCTTGGTGAAGGTGCCGACTGCGATGTCGAGGAAGTAGCCCGCCGGGAACAACTGGCCCATCACCGCTGCCACGCTCGTCGCTG‑GACG‑GCGCGGCAGCGGTGATGGG > 2:1369472/1‑150 GGATCAGGCACTGCGGCCACAACTCGCGCAGGCCTAAGGCCTTGGTGAAGGTGCCGACTGCGATGTCGAGGAAGTAGCCCGCCGGGAACAACTGGCCCATCACCGCTGCCACGCTCGTCGCTG‑GACG‑GCGCGGCAGCGGTGATGGGCCAG < 1:1369472/150‑1 GATCAGGCACTGCGGCCACAACTCGCGCAGGCCTAAGGCCTTGGTGAAGGTGCCGACTGCGATGTCGAGGAAGTAGCCCGCCGGGAACAACTGGCCCATCACCGCTGCCACGCTCGTCGCTG‑GACG‑GCGCGGCAGCGGTGATGG > 2:538388/1‑144 GATCAGGCACTGCGGCCACAACTCGCGCAGGCCTAAGGCCTTGGTGAAGGTGCCGACTGCGATGTCGAGGAAGTAGCCCGCCGGGAACAACTGGCCCATCACCGCTGCCACGCTCGTC‑GCTGGACG‑GCGCGGCAGCGGTGATGG < 1:538388/144‑1 CACCGCTGCCGCGC‑CGTC‑CAGCGACGAGCGTGGCAGCGGTGATGGGCCAGTTGTTCCCGGCGGGCTACTTCCTCGACATCGCAGTCGGCACCTTCACCAAGGCCTTAGGCCTGCGCGAGTTGTGGCCGCAG < 1:574803/131‑1 CACCGCTGCCGCGC‑CGTC‑CAGCGACGAGCGTGGCAGCGGTGATGGGCCAGTTGTTCCCGGCGGGCTACTTCCTCGACATCGCAGTCGGCACCTTCACCAAGGCCTTAGGCCTGCGCGAGTTGTGGCCGCAG > 2:574803/1‑131 CGCTGCCGCGC‑CGTC‑CAGCGACGAGCGTGGCAGCGGTGATGGGCCAGTTGTTCCCGGCGGGCTACTTCCTCGACATCGCAGTCGGCACCTTCACCAAGGCCTTAGGCCTGCGCGAGTTGTGGCCGCAGTGCCTGATCCTGCTGAGCTTCT > 1:1086295/1‑150 CCGCGC‑CGTC‑CAGCGACGAGCGTGGCAGCGGTGATGGGCCAGTTGTTCCCGGCGGGCTACTTCCTCGACATCGCAGTCGGCACCTTCACCAAGGCCTTAGGCCTGCGCGAGTTGTGGCCGCAGTGCCTGATCCTGCTGAGCTTCTTTGCC > 1:947347/1‑150 CAGCGGTGATGGGCCAGTTGTTCCCGGCGGGCTACTTCCTCGACATCGCAGTCGGCACCTTCACCAAGGCCTTAGGCCTGCGCGAGTTGTGGCCGCAGTGCCTGATCCTGCTGAGCTTCTTTGCCGCGTTCACCGGCCTGAGCCTGGCAA < 2:588397/150‑1 CGGCAAAGAAGCTCAGCAGGATCAGGCACTGCGGCCACAACTCGCGCAGGCCTAAGGCCTTGGTGAAGGTGCCGACTGCGATGTCGAGGAAGTAGCCCGCCGGGAACAACTGGCCCATCACCGCTGCCGCGC‑CGTC‑CAGCGACGAGCGTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5940169‑5940017‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaGCGGTGATGGGCCAGTTGTTCCCGGCGGGCTACTTCCTCGACATCGCAGTCGGCACCTTCACCAAGGCCTTAGGCCTGCGCGAGTTGTGGCCGCAGTGCCTGATCCTGCTGAGCTTCTTTGCCGCGTTCACCGGCCTGAGCCTGGCAA > NC_002947/5940046‑5940193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |