| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6009197 | 27 (0.370) | 15 (0.280) | 16/182 | NT | 40.7% | intergenic (+38/+44) | norM/PP_5263 | multidrug resistance protein NorM/GGDEF domain‑containing protein |
| ? | NC_002947 | = 6009208 | 24 (0.450) | intergenic (+49/+33) | norM/PP_5263 | multidrug resistance protein NorM/GGDEF domain‑containing protein | |||||
CGGTGGTGCAGTCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6009018‑6009197‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcctcttcgcgggcacgcccgctcccacaggGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCATCCGCCACTCAAAGCCAAAGGTCAGCGCCACCGCCGCACATG < NC_002947/6009208‑6009062 CGGTGGTGCAGTCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGG < 2:135692/150‑1 GTGGTGCAGTCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGG > 1:827585/1‑147 GTGGTGCAGTCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGG < 2:827585/147‑1 TGGTGCAGTCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCT > 2:1788690/1‑150 TCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGGCCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGG < 2:232929/150‑1 TCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGC < 2:1596232/150‑1 TGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAG > 2:1845757/1‑150 TGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAG < 2:1057466/150‑1 ATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTG > 2:1167303/1‑150 ATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTG > 2:809903/1‑150 TGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGT < 1:849842/150‑1 GTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGGTCGTACAGAAGCTGCTGTTTCGGCCTGACGTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTG < 1:523673/150‑1 CGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCTGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGA < 1:1845757/150‑1 GGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGG < 1:1167303/150‑1 GCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACA > 2:94053/1‑120 GCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACA < 1:94053/120‑1 GCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTG < 2:1063427/126‑1 GCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTG > 1:1063427/1‑126 GGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACA < 2:959802/86‑1 GGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACA > 1:959802/1‑86 GTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGA > 2:61852/1‑99 GTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGA < 1:61852/99‑1 TTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTG < 2:448385/84‑1 TTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTG > 1:448385/1‑84 TACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGG > 1:1174763/1‑87 TACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGG < 2:1174763/87‑1 GCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACA‑GGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCAT > 1:809903/1‑150 tGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCACT‑CCTGAGCGCCTCGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCATCCGCCACTCAAA < 2:1507067/149‑1 GGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCATCCGCCACTAAAA < 2:1275785/150‑1 CCTCTTCGCGGGCACGCCCGCTCCGCCTGGTTCCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCATCCGCCACTCAAAGa > 1:1507067/1‑149 TTCGCGGGCACGCCCGCTCCCACA‑GGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTT < 2:1560078/128‑1 TTCGCGGGCACGCCCGCTCCCACA‑GGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTT > 1:1560078/1‑128 GGGCACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCATCCGCCACTCAAAGCCAAAGGTCA < 1:1808696/150‑1 gctccgCCGCGCCCACAGGGACCTCGCGTT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCATCCGCCACTCAAAGCCAAAGGTCAGC < 1:402127/144‑1 GCACGCCCGCTCCCACA‑GGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCAT > 2:1649881/1‑125 GCACGCCCGCTCCCACA‑GGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCAT < 1:1649881/125‑1 ACGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCATCCGCCACTCAAAGCCAAAGGTCAGCGC > 1:1788690/1‑150 ACGCCCGCTCCCACA‑GGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACA > 1:4681/1‑113 ACGCCCGCTCCCACA‑GGATTGCGCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACA < 2:4681/113‑1 CGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTA > 2:109265/1‑90 CGCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTA < 1:109265/90‑1 GCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCATCCGCCACTCAAAGCCAAAGGTCAGCGCCA > 1:690867/1‑150 GCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCATCCGCCACTCAAA < 1:681554/133‑1 GCCCGCTCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCATCCGCCACTCAAA > 2:681554/1‑133 TCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTA > 2:228355/1‑83 TCCCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTA < 1:228355/83‑1 CCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGC > 2:937729/1‑49 CCACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGC < 1:937729/49‑1 CACAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCATCCGCCACTCAAAGCCAAAGGTCAGCGCCACCGCCGCAC > 2:1916065/1‑150 CAGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCATCCGCCACTCAAAGCCAAAGGTCAGCGCCACCGCCGCACAT < 2:1681774/150‑1 AGGGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCGCGCCTTACCCAACAACCGTTTCATCCGCCACTCAAAGCCAAAGGTCAGCGCCACCGCCGCACATG > 2:554046/1‑150 CGGTGGTGCAGTCGGGATCTGGTGGGGGCTGGCGCTGGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6009018‑6009197‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcctcttcgcgggcacgcccgctcccacaggGACCGCGCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCGGAAGTCAGGCCGAAACAGCAGCTTCTGTACGAACCCCCGCCTTACCCAACAACCGTTTCATCCGCCACTCAAAGCCAAAGGTCAGCGCCACCGCCGCACATG < NC_002947/6009208‑6009062 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |