New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6157884	54 (0.740)	4 (0.060)	4/234	NT	6.7%	coding (192/642 nt)	PP_5401	hypothetical protein
	?	NC_002947	= 6157896	61 (0.890)					coding (204/642 nt)	PP_5401	hypothetical protein

AGCTGGCCCAGTACGGAATGCTGGAGCATCTTCCAAAGCTTTTTACACGAAGTGAGAAGATCCAGGTGTCGGTTCTGGACTCCGCTCGTTACAAGCTGCTGCCTAAGCAGAACCCTCTCAAGCTGTGTAAAAGCGAGGAGGCTGCAGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6157733‑6157884 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccagCAGCGTTGAGATCTGGGCTGCAGCCTCCTCGCTTTTACACAGCTTGAGAGGGTTCTGCTTAGGCAGCAGCTTGTAACGAGCGGAGTCCAGAACCGACACCTGGATCTTCTCACTTCGTGTAAAAAGCTTTGGAAGATGCTCCA  <  NC_002947/6157896‑6157754                                                                                                                                                                                                                                                                                                         AGCTGGCCCAGTACGGAATGCTGGAGCATCTTCCAAAGCTTTTTACACGAAGTGAGAAGATCCAGGTGTCGGTTCTGGACTCCGCTCGTTACAAGCTGCTGCCTAAGCAGAACCCTCTCAAGCTGTGTAAAAGCGAGGAGGCTGCAGCCC                                                                                                                                                   <  2:354111/150‑1     GGCCCAGTACGGAATGCTGGAGCATCTTCCAAAGCTTTTTACACGAAGTGAGAAGATCCAGGTGTCGGTTCTGGACTCCGCTCGTTACAAGCTGCTGCCTAAGCAGAACCCTCTCAAGCTGTGTAAAAGCGAGGAGGCTGCAGCCCA                                                                                                                                                  >  1:595291/1‑147     GGCCCAGTACGGAATGCTGGAGCATCTTCCAAAGCTTTTTACACGAAGTGAGAAGATCCAGGTGTCGGTTCTGGACTCCGCTCGTTACAAGCTGCTGCCTAAGCAGAACCCTCTCAAGCTGTGTAAAAGCGAGGAGGCTGCAGCCCA                                                                                                                                                  <  2:595291/147‑1                                                                                   CGCTCGTTACAAGCTGCTGCCTAAGCAGAACCCTCTCAAGCTGTGTAAAAGCGAGGAGGCTGCAGCCCAGCAGCGTTGAGATCTGGGCTGCA                                                                                                                           <  1:1262876/92‑1                                                                                   CGCTCGTTACAAGCTGCTGCCTAAGCAGAACCCTCTCAAGCTGTGTAAAAGCGAGGAGGCTGCAGCCCAGCAGCGTTGAGATCTGGGCTGCA                                                                                                                           >  2:1262876/1‑92                                                                                                                   CTCTCAAGCTGTGTAAAAGCGAGGAGGCTGCAGCCCAGCAGCGTTGAGATCTGGG                                                                                                                                <  1:1892604/55‑1                                                                                                                   CTCTCAAGCTGTGTAAAAGCGAGGAGGCTGCAGCCCAGCAGCGTTGAGATCTGGG                                                                                                                                >  2:1892604/1‑55                                                                                                                                                  AGCCCAGCAGCGTTGAGATCTGGGCTGCAGCCTCCTCGCTTTTACACAGCTTGAGAGGGTTCTGCTTAGGCAGCAGCTTGTAACGAGCGGAGTCCAGAACCGACACCTGGATCTTCTCACTTCGTGTAAAAAGCTTTGGAAGATGCTCCA  <  2:811268/150‑1                                                                                                                                                                                                                                                                                                         AGCTGGCCCAGTACGGAATGCTGGAGCATCTTCCAAAGCTTTTTACACGAAGTGAGAAGATCCAGGTGTCGGTTCTGGACTCCGCTCGTTACAAGCTGCTGCCTAAGCAGAACCCTCTCAAGCTGTGTAAAAGCGAGGAGGCTGCAGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6157733‑6157884 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccagCAGCGTTGAGATCTGGGCTGCAGCCTCCTCGCTTTTACACAGCTTGAGAGGGTTCTGCTTAGGCAGCAGCTTGTAACGAGCGGAGTCCAGAACCGACACCTGGATCTTCTCACTTCGTGTAAAAAGCTTTGGAAGATGCTCCA  <  NC_002947/6157896‑6157754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.