New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 157046887 (1.190)18 (0.310) 16/196 NT 19.4% intergenic (+34/‑154) pcaF‑I/pcaT beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
?NC_002947 = 1570494 81 (1.410)intergenic (+60/‑128) pcaF‑I/pcaT beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease

Only 100 of 168 total aligned reads displayed.

CACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAAC  >  NC_002947/1570319‑1570616
                                                                                                                                                     |                                                                                                                                                    
cACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTCGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCC                                                                                                                                                      <  2:1328820‑M1/150‑1 (MQ=255)
   gCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAAc                                                                                                                                                   <  2:1023349/150‑1 (MQ=255)
             gactgCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCAc                                                                                                                                         <  1:1104486/150‑1 (MQ=255)
              actgCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGTGTTTGTCCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACg                                                                                                                                        <  2:1827215/150‑1 (MQ=255)
              actgCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACg                                                                                                                                        >  1:727065/1‑150 (MQ=255)
                   gTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATc                                                                                                                                            <  1:61338/141‑1 (MQ=255)
                   gTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATc                                                                                                                                   >  2:1851022/1‑150 (MQ=255)
                    ttGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGCGATCCACGCAATCa                                                                                                                                  >  2:424015/1‑150 (MQ=255)
                     tGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCaacaggtgattgcgtggatcc                                                                                                                                 <  2:706663‑M1/150‑22 (MQ=255)
                      gCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCAcc                                                                                                                                >  1:831455/1‑150 (MQ=255)
                        aCCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctg                                                                                                                              >  2:830934‑M1/1‑126 (MQ=255)
                        aCCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCtg                                                                                                                              >  2:1024942/1‑150 (MQ=255)
                        aCCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCtg                                                                                                                              >  1:1652433/1‑150 (MQ=255)
                         ccAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCtgt                                                                                                                             >  1:1497874/1‑150 (MQ=255)
                         ccAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCtgt                                                                                                                             <  2:876135/150‑1 (MQ=255)
                             cTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttgga                                                                                                                         <  1:853708‑M1/150‑30 (MQ=255)
                               ggAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttggagc                                                                                                                       <  2:1693648‑M1/150‑32 (MQ=255)
                                 agaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttggagcgg                                                                                                                     <  1:830934‑M1/150‑34 (MQ=255)
                                 agaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgg                                                                                                                     >  2:727065‑M2/1‑143 (MQ=255)
                                  gaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttggagcggg                                                                                                                    <  2:393694‑M1/150‑35 (MQ=255)
                                  gaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcggg                                                                                                                    >  1:922070‑M2/1‑142 (MQ=255)
                                     gagTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGg                                                                                                                           >  2:617303‑M2/1‑139 (MQ=255)
                                     gagTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGg                                                                                                                           <  1:617303‑M2/140‑2 (MQ=255)
                                         ggCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACCGGGATCCACGCAATCACCTGTGggagcgggcttcccc                                                                                                             >  1:1341203‑M2/1‑135 (MQ=255)
                                          gCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccg                                                                                                            <  2:626139‑M2/150‑17 (MQ=255)
                                            ggTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcg                                                                                                          <  1:975227‑M2/150‑19 (MQ=255)
                                             gTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAgg                                                                                                                                                <  1:928578/111‑1 (MQ=255)
                                             gTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAgg                                                                                                                                                >  2:928578/1‑111 (MQ=255)
                                             gTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcga                                                                                                         <  2:925181‑M2/150‑20 (MQ=255)
                                                 cAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagag                                                                                                     >  2:202509‑M2/1‑127 (MQ=255)
                                                  aaGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagagg                                                                                                    <  2:1751604‑M2/150‑25 (MQ=255)
                                                  aaGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAAT‑ACCTGTGggagcgggcttccccgcgaagaggc                                                                                                   >  2:1065569‑M2/1‑125 (MQ=255)
                                                   aGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggc                                                                                                   <  2:283405‑M2/150‑26 (MQ=255)
                                                   aGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggc                                                                                                   >  2:688652‑M2/1‑125 (MQ=255)
                                                   aGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTACAACACGGATCCACGCAATCACCTGACggagcgggcctccccgcgaagagcc                                                                                                   <  2:3737‑M2/150‑26 (MQ=255)
                                                   aGGGCCTGGCGAACATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggc                                                                                                   >  1:1851022‑M2/1‑125 (MQ=255)
                                                        cTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCtctc                                                                                              >  1:180099/1‑150 (MQ=255)
                                                         tGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCCCGCAATAAACTGAAGAAGCTTGCTTCCCCGCGAAGAGGCCTCTcc                                                                                             >  2:509905/1‑150 (MQ=255)
                                                          ggCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCt                                                                                            <  2:1290202/150‑1 (MQ=255)
                                                           gCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttggagcg                                                                                                                      <  2:976577‑M1/123‑33 (MQ=255)
                                                            cGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCtgt                                                                                          <  2:1652433/150‑1 (MQ=255)
                                                            cGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCtgt                                                                                          <  2:1497874/150‑1 (MQ=255)
                                                            cGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCtgt                                                                                          <  1:1024942/150‑1 (MQ=255)
                                                             gACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACCCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCtctcagatc                                                                                         >  1:1391152/1‑145 (MQ=255)
                                                              aCCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTga                                                                                        >  1:1094824/1‑150 (MQ=255)
                                                              aCCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACATGTACCGGCCTCTCCGCGTGGAAGCCCGCTCCAACAGCGAGCCACGCAATCACCTGTGAGGGCGGGGTTCCCCGCGACGAGACCTCTCCtgtag                                                                                        >  1:884327/1‑148 (MQ=255)
                                                               ccATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagag                                                                                                     <  1:1009586‑M2/136‑24 (MQ=255)
                                                                       gtgGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAgg                                                                               <  2:144522/150‑1 (MQ=255)
                                                                         gggTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATc                                                                                                                                            <  1:128671/87‑1 (MQ=255)
                                                                          ggTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGccc                                                                            <  2:1185285/150‑1 (MQ=255)
                                                                           gtgtCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCtgtg                                                                                         >  2:1357134/1‑136 (MQ=255)
                                                                           gtgtCGGCCAAGGTCTAGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCa                                                                           >  1:1381299/1‑150 (MQ=255)
                                                                              tCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttggagcgggctt                                                                                                                 >  1:185353‑M1/1‑72 (MQ=255)
                                                                                   cAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTACAACAGGGATCCACGCAATCACCCGTAGGAGCGCGCTTCCCCGCTAATAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGc                                                                   <  1:1694486/150‑1 (MQ=255)
                                                                                            gCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCg                                                          <  1:626139/150‑1 (MQ=255)
                                                                                                  gCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATGACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGGCTCTCCTGTGAGACATAAGGCCCATTGCAAGCCCGATAGCGGAAAGa                                                    >  1:1751895/1‑150 (MQ=255)
                                                                                                  gCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGaa                                                       >  1:1434946/1‑147 (MQ=255)
                                                                                                  gCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGaa                                                       <  2:1434946/147‑1 (MQ=255)
                                                                                                    cATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgt                                                  >  2:1721021/1‑150 (MQ=255)
                                                                                                    cATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgt                                                  <  2:1094824/150‑1 (MQ=255)
                                                                                                        gAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgtgt                                              <  1:798375/150‑1 (MQ=255)
                                                                                                            gggTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTCCt                                          <  1:1937882/150‑1 (MQ=255)
                                                                                                             ggTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTa                                         <  1:377370/150‑1 (MQ=255)
                                                                                                              ttttGACCGGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAg                                        <  1:3737/149‑1 (MQ=255)
                                                                                                              gTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCAAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAg                                        <  1:509905/150‑1 (MQ=255)
                                                                                                                   aCCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgt                                                  >  2:215722/1‑135 (MQ=255)
                                                                                                                   aCCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTAc                                           <  2:838235/142‑1 (MQ=255)
                                                                                                                   aCCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGCGATCCACGCAAACCCCTGTGGGAGGGGGAGTCACGCGGAGGATTGCTCTTCGGGGAGACATAAGACCCATTGCCAGCCCGCTAGCGGAACGAGTGTGTTACTAGGTaag                                   >  1:1203987/1‑148 (MQ=255)
                                                                                                                           cGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAATAGGCCCCCCCTGGGAGACATAAGGCCCATTGCCAAGCCGATAGCCGAACGAGTGTGTTTCTACGTATGTCTAGaaa                           >  2:891833/1‑149 (MQ=255)
                                                                                                                           cGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGACTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAAc                           <  2:831455/150‑1 (MQ=255)
                                                                                                                            ggCCTCTTAGGGGGGAAGCCCGCTCAAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGTCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTAGTTCTAGacat                          <  1:424015/150‑4 (MQ=255)
                                                                                                                             gCCTCTTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggccct                         >  2:1453088‑M1/1‑25 (MQ=255)
                                                                                                                             gCCTCTTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggccct                         >  2:688652‑M1/1‑25 (MQ=255)
                                                                                                                             gCCTCTTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggccct                         >  2:975227‑M1/1‑25 (MQ=255)
                                                                                                                               ctctTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatgg                                     >  2:1009586‑M1/1‑23 (MQ=255)
                                                                                                                               ctctTCGCGGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatgg                                     <  1:1009586‑M1/136‑114 (MQ=255)
                                                                                                                               ctcctcGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTAcc                       <  1:235615/150‑1 (MQ=255)
                                                                                                                                tctTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgcca                               >  2:73616‑M2/1‑48 (MQ=255)
                                                                                                                                tctTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgcca                               <  1:73616‑M2/141‑94 (MQ=255)
                                                                                                                                tctTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCt                      <  1:1805309/150‑1 (MQ=255)
                                                                                                                                    cgcgGGGAAGCCCGCTCCcacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggcccttgcgacc                  <  1:975227‑M1/150‑133 (MQ=255)
                                                                                                                                         ggAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTc             <  2:180099/150‑1 (MQ=255)
                                                                                                                                         ggAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTc             >  1:1515054/1‑150 (MQ=255)
                                                                                                                                           aaGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccga                                                    <  2:185353‑M2/109‑73 (MQ=255)
                                                                                                                                            aGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAg          <  2:602232/150‑1 (MQ=255)
                                                                                                                                            aGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAg          <  1:1315091/150‑1 (MQ=255)
                                                                                                                                              cccGCTCCcacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggcccttgcgaccgccactcttc        >  1:922070‑M1/1‑8 (MQ=255)
                                                                                                                                              cccGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggcccttgcgaccgccactcttc        <  2:393694‑M2/150‑117 (MQ=255)
                                                                                                                                               ccGCTCCcacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggcccttgcgaccgccactcttct       >  2:727065‑M1/1‑7 (MQ=255)
                                                                                                                                               ccGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggcccttgcgaccgccactcttct       <  1:1655631‑M2/150‑118 (MQ=255)
                                                                                                                                               ccGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTc                                 >  1:725787/1‑124 (MQ=255)
                                                                                                                                                cGCTCCcacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccggtacaggtcaaac                                                                                    <  2:423705‑M1/72‑67 (MQ=255)
                                                                                                                                                cGCTCCcacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccggtacaggtcaaac                                                                                    >  1:423705‑M1/1‑6 (MQ=255)
                                                                                                                                                cGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgc                                 >  1:976577‑M2/1‑32 (MQ=255)
                                                                                                                                                cGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttg                                                         >  1:182930‑M2/1‑32 (MQ=255)
                                                                                                                                                cGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttg                                                         <  2:182930‑M2/99‑68 (MQ=255)
                                                                                                                                                   tCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggcccttgcgaccgccactcttctccag   <  1:853708‑M2/150‑122 (MQ=255)
                                                                                                                                                   tCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTaaa   <  1:698267/150‑1 (MQ=255)
                                                                                                                                                    ccAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggcccttgcgaccgccactcttctccagc  >  2:853708‑M2/1‑28 (MQ=255)
                                                                                                                                                     ccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggcccttgcgaccgccactc           >  2:617303‑M1/1‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
CACGCCTGGTACTGACTGCGTTGCACCAGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAAC  >  NC_002947/1570319‑1570616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.