New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 165399455 (0.750)7 (0.100) 6/238 NT 11.1% coding (2817/4527 nt) PP_1449 hypothetical protein
?NC_002947 = 1654014 59 (0.840)coding (2797/4527 nt) PP_1449 hypothetical protein

ACATTCAGGTCTTCGCCGGTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGC  >  NC_002947/1653854‑1654143
                                                                                                                                            |                                                                                                                                                     
aCATTCAGGTCTTCGCCGGTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCt                                                                                                                                              >  1:1780988/1‑150 (MQ=255)
  aTTCAGGTCTTCGCCGGTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCgaccagggcac                                                                                                                                            >  1:325891‑M1/1‑139 (MQ=255)
  aTTCAGGTCTTCGCCGGTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCtgt                                                                                                                                            <  2:1544621/150‑1 (MQ=255)
  aTTCAGGTCTTCGCCGGTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCCGCTGGGCGTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCtgt                                                                                                                                            >  2:1182890/1‑150 (MQ=255)
           ttCGCCGGTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTc                                                                                                                                   >  2:725570/1‑150 (MQ=255)
           ttCGCCGGTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTc                                                                                                                                   >  1:1678205/1‑150 (MQ=255)
               ccGGTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTg                                                                                                                                      >  2:796320/1‑143 (MQ=255)
               ccGGTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTg                                                                                                                                      <  1:796320/143‑1 (MQ=255)
                  gTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCgaccagggcacagcctggcgggccaat                                                                                                                            >  2:190272‑M1/1‑123 (MQ=255)
                  gTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCggccaat                                                                                                                            >  2:1678205‑M2/1‑143 (MQ=255)
                  gTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCggcca                                                                                                                              >  2:643703‑M2/1‑143 (MQ=255)
                  gTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCggcca                                                                                                                              <  1:643703‑M2/148‑6 (MQ=255)
                    gCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCtaccagggcacagcctggcgggccaatgc                                                                                                                          <  1:564779‑M1/150‑30 (MQ=255)
                      tGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCgaccagggcacagcctggcgggccaatgccg                                                                                                                        <  2:325891‑M1/150‑32 (MQ=255)
                      tGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAgtgtgt                                                                                                                        >  1:193167/1‑150 (MQ=255)
                        gtgtCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTcg                                                                                                                      >  1:1075589/1‑149 (MQ=255)
                           tCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTAGTCGGCCAGTGTGTCAGcc                                                                                                                   >  1:1136247/1‑150 (MQ=255)
                            ccAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTGGGCGGCGCTCAGCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGGCAGTGCGTAAGcat                                                                                                                  >  2:699943/1‑148 (MQ=255)
                             cAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATGGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCtt                                                                                                                 >  1:210980/1‑150 (MQ=255)
                              aGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTg                                                                                                                >  2:123986/1‑150 (MQ=255)
                                       tCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGAcc                                                                                                       >  1:1774518/1‑150 (MQ=255)
                                       tCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGAcc                                                                                                       >  1:1329950/1‑150 (MQ=255)
                                          ccaccaTAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCttt                                                                                                    >  2:932983/1‑150 (MQ=255)
                                             ccaTAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGACTCTCAGCGAGCCGGCATTAGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTtgct                                                                                                 <  1:725570/150‑1 (MQ=255)
                                              caTAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTtgctg                                                                                                >  2:1716132/1‑150 (MQ=255)
                                               aTAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTtgctgc                                                                                               <  1:867193/150‑1 (MQ=255)
                                                tAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCg                                                                                              <  1:932983/150‑1 (MQ=255)
                                                  ggCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGa                                                                                            <  1:1044878/150‑1 (MQ=255)
                                                    ccAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCGACCAGGGCACAGCCTGGCGggccaatgccggctcgctgaaaatcgaggcgcagcagcatc                                                                                          >  1:190272‑M2/1‑109 (MQ=255)
                                                     cAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGa                                                                                                         <  2:1455828/134‑1 (MQ=255)
                                                     cAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGa                                                                                                         >  1:1455828/1‑134 (MQ=255)
                                                        gCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTc                                                                                      <  2:1055401/150‑1 (MQ=255)
                                                          gTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCgaccaggacacagcctggcgggccaatgccg                                                                                                                        >  1:362520‑M1/1‑83 (MQ=255)
                                                          gTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCgaccaggacacagcctggcgggccaatgccg                                                                                                                        <  2:362520‑M1/114‑32 (MQ=255)
                                                          gTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGc                                                                                    <  2:1317792/150‑1 (MQ=255)
                                                             gAACGGTGGTTTCATGGGTTTTCTGGACGACGCCCTCCTGATACTGCTCCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGa                                                                                 <  2:210980/150‑1 (MQ=255)
                                                                   tggtTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTgcg                                                                           <  2:1780988/150‑3 (MQ=255)
                                                                   tggtTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAg                                                                           <  1:1182890/150‑1 (MQ=255)
                                                                          cTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGc                                                                                                                                               >  1:1180784/1‑75 (MQ=255)
                                                                          cTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGc                                                                                                                                               <  2:1180784/75‑1 (MQ=255)
                                                                           tGGGTATTTTCGGCGGCGCTCACCTGGTGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCa                                                                   >  2:1490207/1‑150 (MQ=255)
                                                                           tGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGa                                                                                            <  2:1320047/125‑1 (MQ=255)
                                                                           tGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTAAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGa                                                                                            >  1:1320047/1‑125 (MQ=255)
                                                                                              tCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGAc                                                                                                              <  1:1388662/88‑1 (MQ=255)
                                                                                              tCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGAc                                                                                                              >  2:1388662/1‑88 (MQ=255)
                                                                                                  cTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCtt                                            >  1:783213/1‑150 (MQ=255)
                                                                                                    gATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCcgccaggctgtgccctggtcggccaatgccggctcgctgaaaatcgaggcgcagcagcatcaggtgagcgccgccgaaaatacccaggaaaccaccgttcaacgcctgg                                          >  1:190272‑M1/1‑41 (MQ=255)
                                                                                                    gATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGa                                          <  1:84394/150‑1 (MQ=255)
                                                                                                    gATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGa                                          <  2:1702783/150‑1 (MQ=255)
                                                                                                     aTGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCACGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAg                                         <  1:699943/150‑1 (MQ=255)
                                                                                                        ctgctgcGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGgtg                                      >  2:1042715/1‑150 (MQ=255)
                                                                                                          gctgcGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGCCCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGtt                                    >  1:1726475/1‑150 (MQ=255)
                                                                                                               gcCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGAcc                               <  2:1329950/150‑1 (MQ=255)
                                                                                                                 cTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGt                             >  1:1113652/1‑150 (MQ=255)
                                                                                                                 cTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGt                             >  2:148667/1‑150 (MQ=255)
                                                                                                                  tCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGAc                                                                                <  2:1675151/98‑1 (MQ=255)
                                                                                                                  tCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGAc                                                                                >  1:1675151/1‑98 (MQ=255)
                                                                                                                  tCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTc                            >  2:800927/1‑150 (MQ=255)
                                                                                                                  tCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTc                            <  1:800927/150‑1 (MQ=255)
                                                                                                                        ttCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCg                      <  2:1113652/150‑1 (MQ=255)
                                                                                                                                  cGGCATTGGCCCGCCAGGCTGTGTCCTGGTCggccaatgccggctcgctgaaaatcgaggcgcagcagcatcaggtgagcgccgccgaaaatacccaggaaaccaccgttcaac                                                >  1:362520‑M2/1‑31 (MQ=255)
                                                                                                                                  cGGCATTGGCCCGCCAGGCTGTGTCCTGGTCggccaatgccggctcgctgaaaatcgaggcgcagcagcatcaggtgagcgccgccgaaaatacccaggaaaccaccgttcaac                                                <  2:362520‑M2/114‑84 (MQ=255)
                                                                                                                                  cGGCATTGGCCCGCCAGGCTGTGCCCTGGTCggccaatgccggctcgctgaaaatcgaggcgcagcagcatcaggtgagcgccgccgaaaatacccaggaaaccaccgttcaacgcctggcctatggtggcgatgcgcgcctggacacca            <  2:325891‑M2/150‑120 (MQ=255)
                                                                                                                                   ggCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCAACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCGCGCt           >  1:1295511/1‑150 (MQ=255)
                                                                                                                                    gCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGGCCGTCATGTCGGCCCCCACGCTg          >  1:1811687/1‑150 (MQ=255)
                                                                                                                                    gCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACATTTGCTGCGGACAACTCGCt                                                                                   >  1:1142218/1‑77 (MQ=255)
                                                                                                                                    gCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACATTGTCTGCGGACAACTCGCt                                                                                   <  2:1142218/77‑1 (MQ=255)
                                                                                                                                    gCATTGGCCCGCCAGGCTGTGCCCTGGTAggccaatgccggctcgctgaaaatcgaggcgcagcagcatcaggtgagcgccgccgaaaatacccaggaaaccaccgttcaacgcctggcctatggtggcgatgcgcgcctggacaccagc          <  1:564779‑M2/150‑122 (MQ=255)
                                                                                                                                      aTTGGCCgaccagggcacagcctggcgggccaatgccggctcgctgaaaatcgaggcgcagcagcatcaggtgagcgccgccgaaaatacccaggaaaccaccgttcaacgcctggcctatggtggcgatgcgcgcctggacaccagcac        >  2:1678205‑M1/1‑7 (MQ=255)
                                                                                                                                      aTTGGCCCGCCAGGCTGTGCCCTGGTCggccaatgccggctcgctgaaaatcgaggcgcagcagcatcaggtgagcgccgccgaaaatacccaggaaaccaccgttcaacgcctggcctatggtggcgatgcgcgcctggacaccagcac        >  2:190272‑M2/1‑27 (MQ=255)
                                                                                                                                      aTTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTggg        >  2:1572092/1‑150 (MQ=255)
                                                                                                                                       ttGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGa       <  2:1774518/150‑1 (MQ=255)
                                                                                                                                        tGGCCgaccagggcacagcctggcgggccaatgccggctcgctgaaaatcgaggcgcagcagcatcaggtgagcgccgccgaaaatacccaggaaaccaccgttcaacgcctggcctatggtggcgatgcgcgcctggacaccagcac        <  1:643703‑M1/148‑144 (MQ=255)
                                                                                                                                        tGGCCgaccagggcacagcctggcgggccaatgccggctcgctgaaaatcgaggcgcagcagcatcaggtgagcgccgccgaaaatacccaggaaaccaccgttcaacgcctggcctatggtggcgatgcgcgcctggacaccagcac        >  2:643703‑M1/1‑5 (MQ=255)
                                                                                                                                          gaccGCCAGGCTGTGCCCTGGCCGGCCAGTGTGTGAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCCTGAGGTGTTCGGCCGTCATGTCGGCCCGCCGCCTGGGAGGt    >  2:473593/3‑150 (MQ=255)
                                                                                                                                            ccGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCGTCGCTAGGGCGCTGGTTGTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGc  >  1:1090191/1‑150 (MQ=255)
                                                                                                                                            |                                                                                                                                                     
ACATTCAGGTCTTCGCCGGTGCTGGTGTCCAGGCGCGCATCGCCACCATAGGCCAGGCGTTGAACGGTGGTTTCCTGGGTATTTTCGGCGGCGCTCACCTGATGCTGCTGCGCCTCGATTTTCAGCGAGCCGGCATTGGCCCGCCAGGCTGTGCCCTGGTCGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGC  >  NC_002947/1653854‑1654143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.