New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 18441793 (0.040)48 (0.680) 40/240 NT 51.4% coding (657/2754 nt) gacS sensor protein GacS
?NC_002947 2177745 = 88 (1.250)intergenic (+103/‑63) PP_5485/PP_1931 GNAT family acetyltransferase/hypothetical protein

Only 100 of 127 total aligned reads displayed.

TGGATTTCGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACAGGCTGGTGAACA  >  NC_002947/1844033‑1844327
                                                                                                                                                  |                                                                                                                                                    
aaaagacctcaagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGc                                                                                                                                                   <  2:272580‑M1/7‑1 (MQ=255)
 aaagacctcaagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCa                                                                                                                                                  >  2:233450‑M1/143‑150 (MQ=255)
     ttCGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgt                                                                                                                                              <  1:654940‑M1/150‑9 (MQ=255)
       ctcaagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGtt                                                                                                                                            <  1:504995‑M1/14‑1 (MQ=255)
         aTGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgt                                                                                                                                            <  1:1068487‑M1/148‑11 (MQ=255)
         aTGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgt                                                                                                                                            >  2:1068487‑M1/1‑138 (MQ=255)
         aTGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaa                                                                                                                                         >  2:637731‑M1/1‑137 (MQ=255)
           ggTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTTCCGGTTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaa                                                                                                                                        <  1:19135‑M1/150‑15 (MQ=255)
           agaacgactcacatcgccacatgcgccccagcaaggcggtttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCgttcttt                                                                                                                                        <  1:459297‑M1/18‑2 (MQ=255)
           agaacgactcaaaacgccacatgcgccccagcacggcgattcgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGttcttc                                                                                                                                        >  1:400425‑M1/133‑150 (MQ=255)
            gaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCg                                                                                                                                       <  1:472364‑M1/19‑1 (MQ=255)
             aacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGa                                                                                                                                      >  1:132907‑M1/131‑150 (MQ=255)
             aacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGa                                                                                                                                      >  1:1403710‑M1/131‑150 (MQ=255)
              ttCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATCCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacg                                                                                                                                     >  2:229647‑M1/1‑133 (MQ=255)
                gactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGttcttc                                                                                                                                        >  1:1081322‑M1/128‑145 (MQ=255)
                 cAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgccc                                                                                                                                  >  2:680830‑M1/1‑130 (MQ=255)
                 actcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTg                                                                                                                                  >  1:551386‑M1/127‑150 (MQ=255)
                 actcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTg                                                                                                                                  <  1:530936‑M1/24‑1 (MQ=255)
                  ctcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCa                                                                                                                                                  >  2:1908394‑M1/126‑133 (MQ=255)
                  ctcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCa                                                                                                                                                  <  1:1908394‑M1/8‑1 (MQ=255)
                   tcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGttct                                                                                                                                          >  1:843534‑M1/125‑140 (MQ=255)
                   tcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGttct                                                                                                                                          <  2:843534‑M1/16‑1 (MQ=255)
                   tcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGc                                                                                                                                <  1:1516346‑M1/26‑1 (MQ=255)
                    cacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGcc                                                                                                                               >  2:472364‑M1/124‑150 (MQ=255)
                     acatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCg                                                                                                                              <  1:1277806‑M1/28‑1 (MQ=255)
                       cTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCTGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggtt                                                                                                                            <  1:517210‑M1/150‑27 (MQ=255)
                       atcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTGGGCAGGCGTTCTTCGAGGTGGCCGTc                                                                                                                            <  1:786918‑M1/30‑1 (MQ=255)
                        tcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTcc                                                                                                                           <  2:1199279‑M1/31‑1 (MQ=255)
                         cgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCt                                                                                                                          >  1:1199279‑M1/119‑150 (MQ=255)
                            gcACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaac                                                                                                                                      >  2:875567‑M1/1‑119 (MQ=255)
                            gcACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCGGCAGGc                                                                                                                                               <  2:1549755/126‑1 (MQ=255)
                            gcACGTCTTCGGTGGCCTGGTCGATGCCGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCGGCCCATGGTCcagcctgtgagaaaatgcccgcgcgtgtcta                                                                                                                       >  2:603190‑M1/1‑119 (MQ=255)
                              aCGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaac                                                                                                                     <  1:1657562‑M1/150‑34 (MQ=255)
                                gTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaacct                                                                                                                   >  1:253653‑M1/1‑115 (MQ=255)
                                  cTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCGGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttc                                                                                                                 >  2:1743038‑M1/1‑113 (MQ=255)
                                   gccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGa                                                                                                                       >  1:1775329‑M1/109‑143 (MQ=255)
                                       gTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCCGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtc                                                                                                            >  1:669512‑M1/1‑108 (MQ=255)
                                             ggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGc                                                                                                      <  2:1620574‑M1/52‑1 (MQ=255)
                                                  tttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGAt                                                                                                 >  1:689881‑M1/94‑150 (MQ=255)
                                                    tGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtgg                                                                                               <  1:1233687‑M1/150‑56 (MQ=255)
                                                    tGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggg                                                                                              <  1:637731‑M1/150‑57 (MQ=255)
                                                       tgtgTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgt                                                                                                                                              >  1:180362‑M1/1‑92 (MQ=255)
                                                       tgtgTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgt                                                                                                                                              <  2:180362‑M1/100‑9 (MQ=255)
                                                           ttGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaat                                                                                        >  2:313318‑M1/1‑88 (MQ=255)
                                                                 ttcttcGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgt                                                                                                                                              <  1:736460‑M1/90‑9 (MQ=255)
                                                                 ttcttcGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgt                                                                                                                                              >  2:736460‑M1/1‑82 (MQ=255)
                                                                 ttcttcGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTAcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaa                                                                                  >  1:1490733‑M1/1‑82 (MQ=255)
                                                                  tcttcGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaag                                                                                 <  1:229647‑M1/150‑70 (MQ=255)
                                                                   aatttcttgccagtttggcaagcctctctccacccatgtgtccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGt                                                                                >  2:1124359‑M1/77‑150 (MQ=255)
                                                                   aatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGt                                                                                >  2:1795643‑M1/77‑150 (MQ=255)
                                                                      ttcttgccagtttggcaagcctctctagctccctgcgctctgcaacgcatttcgcgtcttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCGTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGa                                                                             >  2:459297‑M1/74‑150 (MQ=255)
                                                                       gTGGGCATTCTGCAGGGTTTAGGAAATGCAGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgatt                                                                            >  2:222069‑M1/1‑76 (MQ=255)
                                                                        cttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGtggccgaccca                                                                                                                         <  1:1861377‑M1/33‑6 (MQ=255)
                                                                            cATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgat                                                                             <  1:280664‑M1/144‑74 (MQ=255)
                                                                            cATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgat                                                                             >  2:280664‑M1/1‑71 (MQ=255)
                                                                              ttCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtgctgacaatcatgaagcgattcatcgaa                                                                     <  1:1232549‑M1/150‑82 (MQ=255)
                                                                              agtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCgg                                                                     >  2:504995‑M1/66‑150 (MQ=255)
                                                                                  gCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtg                                                                 <  1:313318‑M1/150‑86 (MQ=255)
                                                                                   ggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAg                                                                                                                                                 >  1:93464‑M1/61‑69 (MQ=255)
                                                                                   ggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAg                                                                                                                                                 <  2:93464‑M1/9‑1 (MQ=255)
                                                                                   ggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCAt                                                                <  2:1565199‑M1/90‑1 (MQ=255)
                                                                                    gcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGa                                                                                                                  <  2:1027596‑M1/40‑1 (MQ=255)
                                                                                    gcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGa                                                                                                                  >  1:1027596‑M1/60‑99 (MQ=255)
                                                                                    gcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATg                                                               <  1:1787049‑M1/91‑1 (MQ=255)
                                                                                      aagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGAt                                                                                                 <  2:190199‑M1/57‑1 (MQ=255)
                                                                                          tCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCGCATGGCTGCCCATGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAgc                                                         <  1:1180362/150‑1 (MQ=255)
                                                                                             tctagatccctgcgcacttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGcc                                                      <  2:1074285‑M1/100‑1 (MQ=255)
                                                                                                 tGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcagg                                                  <  2:381172‑M1/150‑101 (MQ=255)
                                                                                                    ggTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggtta                                               >  1:267720‑M1/1‑47 (MQ=255)
                                                                                                     gTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgat                                                                             >  1:1183530‑M1/1‑46 (MQ=255)
                                                                                                     gTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgat                                                                             <  2:1183530‑M1/119‑74 (MQ=255)
                                                                                                      ctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCg                                             >  1:83216‑M1/42‑150 (MQ=255)
                                                                                                       tgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGc                                            <  2:1354104‑M1/110‑1 (MQ=255)
                                                                                                       tGATGCCGTGGGCCGGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacat                                            <  1:1743038‑M1/150‑107 (MQ=255)
                                                                                                          gcacttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGa                                         >  1:1074285‑M1/38‑150 (MQ=255)
                                                                                                           cccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAg                                        >  2:1277806‑M1/37‑150 (MQ=255)
                                                                                                              ttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTc                                                                                  <  1:986239‑M1/72‑1 (MQ=255)
                                                                                                              ttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTc                                                                                  >  2:986239‑M1/34‑105 (MQ=255)
                                                                                                                caacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTCTGTTGATTGACCCCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCca                                   >  1:840495‑M1/32‑150 (MQ=255)
                                                                                                                  acgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCcagg                                 <  2:1912952‑M1/121‑1 (MQ=255)
                                                                                                                   ccAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagt                                >  1:404329‑M1/1‑32 (MQ=255)
                                                                                                                      atttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCtt                                                                                                                         <  2:1502135‑M1/33‑1 (MQ=255)
                                                                                                                      atttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCtt                                                                                                                         >  1:1502135‑M1/26‑58 (MQ=255)
                                                                                                                       ttCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcct                            <  2:253653‑M1/150‑123 (MQ=255)
                                                                                                                         tcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGa                          >  1:272580‑M1/23‑150 (MQ=255)
                                                                                                                         tcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGa                          >  2:1787049‑M1/23‑150 (MQ=255)
                                                                                                                          cgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAg                         >  1:965764‑M1/22‑150 (MQ=255)
                                                                                                                           tCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaggtctctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggac                        <  1:992365‑M1/150‑127 (MQ=255)
                                                                                                                           gcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGAt                                                                                                 >  2:98687‑M1/21‑77 (MQ=255)
                                                                                                                            ccAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgccggaggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacg                       >  1:723797‑M1/1‑23 (MQ=255)
                                                                                                                                cTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacgacta                   <  2:1490733‑M1/150‑132 (MQ=255)
                                                                                                                                     acacagcctgGGTCGGCAGGCGTTCTTCTAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACa              <  1:424842‑M1/140‑1 (MQ=255)
                                                                                                                                     acacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCCAAATTCACCTGCTTAATTGCGGGCTGGATGCTTGCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACa              <  1:528553‑M1/140‑1 (MQ=255)
                                                                                                                                       acagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACAgg            <  1:877341‑M1/142‑1 (MQ=255)
                                                                                                                                        cagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATCGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACAGGc           >  1:1877242‑M1/8‑150 (MQ=255)
                                                                                                                                           cctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACAGGCTgg        <  1:1819125‑M1/146‑1 (MQ=255)
                                                                                                                                            ctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATgc                                                              <  2:599260‑M1/92‑1 (MQ=255)
                                                                                                                                            cATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtga                                                                <  2:77191‑M1/93‑87 (MQ=255)
                                                                                                                                            cATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtga                                                                >  1:77191‑M1/1‑7 (MQ=255)
                                                                                                                                               GGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACAGGCTGGTGaa    >  2:1819125‑M1/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
TGGATTTCGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACAGGCTGGTGAACA  >  NC_002947/1844033‑1844327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.