New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3954595	67 (0.920)	5 (0.070)	5/236	NT	7.1%	coding (5834/5844 nt)	mnxG	manganese‑oxidizing multicopper oxidase
	?	NC_002947	= 3954608	68 (0.980)					coding (5821/5844 nt)	mnxG	manganese‑oxidizing multicopper oxidase

CCCCGTTCCTGCAACAGCTCGCGCGGGTCGCACCATAGCTTTTCGTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCACCGCCGGCACTCGGCAGCATGAAGCTGAAGTGAGC  >  NC_002947/3954448‑3954743                                                                                                                                                    |                                                                                                                                                      ccccGTTCCTGCAACAGCTCGCGCGGGTCGCACCATAGCTTTTCGTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCgg‑g                                                                                                                                                    <  2:537234/150‑1 (MQ=255)        ccTGCAACAGCTCGCGCGGGTCGCACCATAGCTTTTCGTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTg                                                                                                                                             <  1:1207978/150‑1 (MQ=255)             aaCAGCTCGCGCGGGTCGCACCATAGCTTTTCGTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGc                                                                                                                                        <  2:168377‑M2/150‑2 (MQ=255)                   gcttgcgggtcGCACCATAGCTTTTCTTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTATCATGGCTTGCTGAGGGCTAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGccggcaacggccccggcgca                                                                                                                                   <  2:66888‑M1/146‑21 (MQ=255)                     gcgcgGGTCGCACCATAGCTTTTCGTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGACGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTc                                                                                                                                >  1:911736/1‑150 (MQ=255)                           gTCGCACCATAGCTTTTCGTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGt                                                                                                                          >  2:1759335/1‑150 (MQ=255)                                  cATAGCTTTTCGTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGc                                                                                                                   >  1:1072249/1‑150 (MQ=255)                                     aGCTTTTCGTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAg                                                                                                                >  2:1548565/1‑150 (MQ=255)                                        ttttCGTAGGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCaa                                                                                                                 >  2:1361725/1‑146 (MQ=255)                                        ttttCGTAGGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCaa                                                                                                                 <  1:1361725/146‑1 (MQ=255)                                        ttttCGTACGCCACGCCCGGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCgg                                                                                                                                                      >  2:1683327/1‑110 (MQ=255)                                        ttttCGTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCgg                                                                                                                                                      <  1:1683327/110‑1 (MQ=255)                                        ttttCGTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATc                                                                                                             <  1:1759335/150‑1 (MQ=255)                                          ttCGTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATccc                                                                                                           >  1:399318/1‑150 (MQ=255)                                            cGTACGCCACGCCCAGGTCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATccccc                                                                                                         >  2:683178/1‑150 (MQ=255)                                            cGTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATccccc                                                                                                         <  2:911736/150‑1 (MQ=255)                                             gTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGGGGCGCTTCGTTGGTCACCCGCAAGATCCCCca                                                                                                        >  1:1293260/1‑150 (MQ=255)                                                 gccacgccCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTACGCAAGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGc                                                                                                    >  1:317356/1‑150 (MQ=255)                                                         cAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGagag                                                                                            >  1:1916574/1‑150 (MQ=255)                                                          aGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAgg                                                                                           <  2:1916574/150‑1 (MQ=255)                                                           ggCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGt                                                                                          >  2:321367/1‑150 (MQ=255)                                                            gCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGcc                                                                                                                                                 <  1:1405778/94‑1 (MQ=255)                                                            gCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGcc                                                                                                                                                 >  2:1405778/1‑94 (MQ=255)                                                            gCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATc                                                                                                             >  2:753496/1‑130 (MQ=255)                                                            gCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATc                                                                                                             <  1:753496/130‑1 (MQ=255)                                                                  cAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGccggcaacggccccggcgcagtga                                                                                                                               >  1:922279‑M1/1‑83 (MQ=255)                                                                  cAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGccggcaacggccccggcgcagtga                                                                                                                               <  2:922279‑M1/107‑25 (MQ=255)                                                                    gcgcTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAgg                                                                                 >  2:1311887/1‑150 (MQ=255)                                                                    gcgcTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGCCGGCAACGGCCCggcgcagtgacggaaggggaacgcgagcat                                                                                                            <  1:456166‑M2/125‑31 (MQ=255)                                                                    gcgcTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGC‑CGGCAACGGCCCcggcgcagtgacggaaggggaacgcgagcat                                                                                                          >  2:456166‑M2/1‑94 (MQ=255)                                                                      gcTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCcaca                                                                                                      >  1:1295692/1‑127 (MQ=255)                                                                      gcTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGACCCCCcaca                                                                                                      <  2:1295692/127‑1 (MQ=255)                                                                       cTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCag                                                                                                                       >  2:1327180/1‑108 (MQ=255)                                                                       cTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCAc                                                                                                                       <  1:1327180/109‑1 (MQ=255)                                                                            cccAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATcccc                                                                                                          >  2:1227205/1‑117 (MQ=255)                                                                            cccAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATcccc                                                                                                          <  1:1227205/117‑1 (MQ=255)                                                                            cccAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAg                                                                         >  1:47216/1‑150 (MQ=255)                                                                             ccAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGt                                                                        >  2:329327/1‑150 (MQ=255)                                                                              catcACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCTTGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTc                                                                       <  2:317356/147‑1 (MQ=255)                                                                              cAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTc                                                                       >  2:286198/1‑150 (MQ=255)                                                                                gCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTcgc                                                                     <  1:329327/150‑1 (MQ=255)                                                                                 cACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTcgcg                                                                    <  1:1075768/150‑1 (MQ=255)                                                                                  aCTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCgg                                                                   >  1:898028/1‑150 (MQ=255)                                                                                       ccccAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAg                                                              <  1:1311887/150‑1 (MQ=255)                                                                                       ccccAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCAGTTGACGGCGGCGATTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGATAGGTTGCCGTAGGAGGCGTAATCGCGAAACAg                                                              >  2:696329/1‑150 (MQ=255)                                                                                        cccAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAgg                                                             >  2:505731/1‑150 (MQ=255)                                                                                         ccAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTcgc                                                                     >  1:447948/1‑141 (MQ=255)                                                                                         ccAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTcgc                                                                     <  2:447948/141‑1 (MQ=255)                                                                                          cAAGTGAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTa                                                           <  2:379703/150‑1 (MQ=255)                                                                                                     ggCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCa                                                >  1:1774501/1‑150 (MQ=255)                                                                                                          gTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGC‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACACCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACcgcg                                           >  2:503360/1‑150 (MQ=255)                                                                                                           tCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGt                                          >  2:40843/1‑150 (MQ=255)                                                                                                           gcTTTTTGTGCATCCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGt                                          <  1:123702/149‑1 (MQ=255)                                                                                                             tttttGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCa                                                <  1:939931/142‑1 (MQ=255)                                                                                                             tttttGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCa                                                >  2:939931/1‑142 (MQ=255)                                                                                                             tttttGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTg                                        >  2:1409001/1‑150 (MQ=255)                                                                                                             tttttGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTg                                        <  1:683178/150‑1 (MQ=255)                                                                                                             tttttGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTg                                        <  2:1794092/150‑1 (MQ=255)                                                                                                             tttttGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑AGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTg                                        >  1:69908/1‑150 (MQ=255)                                                                                                                ttGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGNAGGCGGNGTAGTCGCGGAANAGGTAGTCACCCGCCACCGCGTTGGCa                                     <  1:1381755/150‑1 (MQ=255)                                                                                                                  gTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTg                                        >  1:132461/1‑145 (MQ=255)                                                                                                                  gTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTg                                        <  2:132461/145‑1 (MQ=255)                                                                                                                   ttCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCAccg                                  >  1:1236724/1‑150 (MQ=255)                                                                                                                    tCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCAccgc                                 <  2:47216/150‑1 (MQ=255)                                                                                                                      aTGCTCGCGTTCCCCTTCCGTCACTGCGCCGgggccgttgccggcggcgcagtgacggaaggggaacgcgagcatgaacaaaaagactcgccctgcttacttgggggtagtgctgggggtagcgc                                                         <  1:456166‑M1/125‑95 (MQ=255)                                                                                                                      aTGCTCGCGTTCCCCTTCCGTCACTGCGCCGgggccgttgccggcggcgcagtgacggaaggggaacgcgagcatgaacaaaaagactcgccctgcttacttgggggtagtgctgggggtagcgc                                                         >  2:456166‑M1/1‑31 (MQ=255)                                                                                                                      aTGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCAccgccg                               >  2:1838485/1‑150 (MQ=255)                                                                                                                      aTGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCAccgccg                               <  2:1072249/150‑1 (MQ=255)                                                                                                                      aTGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCAccgccg                               >  2:1587130/1‑150 (MQ=255)                                                                                                                        gCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAgg                                                                                 <  2:625403/98‑1 (MQ=255)                                                                                                                        gCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAgg                                                                                 >  1:625403/1‑98 (MQ=255)                                                                                                                          tCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCACCGCCGGCAc                           >  2:946266/1‑150 (MQ=255)                                                                                                                                   ccTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCACCGCCGGCACTCGgcaaca                  >  2:736388/1‑150 (MQ=255)                                                                                                                                   ccTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCATCGTTGGGCAACCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCACCGCCGGCACTCGgcagca                  >  1:1567952/1‑150 (MQ=255)                                                                                                                                    cTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCAGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCACCGCCGGCACTCGgcagca                  >  1:1034265/1‑149 (MQ=255)                                                                                                                                    cTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCAGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCACCGCCGGCACTCGgcagca                  <  2:1034265/149‑1 (MQ=255)                                                                                                                                        cGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCACCGCCGGCACTCGGCAGCATGAAg             <  1:505731/150‑1 (MQ=255)                                                                                                                                         gTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCACCGCCGGCACTCGGCAGCCTGAAGc            >  1:288995/1‑150 (MQ=255)                                                                                                                                          tCACTGCGCCGG‑GGCCGTTGCCGGcggcgcagtgacggaaggggaacgcgagcatgaacaaaaagactcgccctgcttacttgggggtagtgctgggggtagcgctg                                                      <  2:922279‑M2/107‑84 (MQ=255)                                                                                                                                          tCACTGCGCCGG‑GGCCGTTGCCGGcggcgcagtgacggaaggggaacgcgagcatgaacaaaaagactcgccctgcttacttgggggtagtgctgggggtagcgctg                                                      >  1:922279‑M2/1‑24 (MQ=255)                                                                                                                                            aCTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCACCGCCGGCACTCGGCAGCATGAAGCTGa         >  2:24446/1‑150 (MQ=255)                                                                                                                                              tGCGCCGG‑GGCCGTTGCCGGcggcgcagtgacggaaggggaacgcgagcatgaacaaaaagactagccctcagcaagccatgatagtgctgggggtagcgctgatcggcctgggcgtggcgtaagaaaagctatggtgcgacccgcaagc       <  2:66888‑M2/150‑131 (MQ=255)                                                                                                                                              tGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCACCGCCGGCACTCGGCAGCATGAAGCTGAAg       >  1:1462767/1‑150 (MQ=255)                                                                                                                                                 gcCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCACCGCCGGCACTCGGCAGCATGAAGCTGAAGTGa    >  2:200384/1‑150 (MQ=255)                                                                                                                                                    gccggcaacggccccggcgcagtgacggaaggggaacgcgagcatgaacaaaaagactcgccctgcttacttgggggtagtgctgggggtagcgctgatcggcctgggcgtggcgtacgaaaagctatggtgcgacccgcgcgagctgtt  <  2:168377‑M1/150‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                      CCCCGTTCCTGCAACAGCTCGCGCGGGTCGCACCATAGCTTTTCGTACGCCACGCCCAGGCCGATCAGCGCTACCCCCAGCACTACCCCCAAGTAAGCAGGGCGAGTCTTTTTGTTCATGCTCGCGTTCCCCTTCCGTCACTGCGCCGG‑GGCCGTTGCCGGCGGCGCTTCGTTGGTCACCCGCAAGATCCCCCACAGCCCCGAGAGGTTGCCGTAGGCGGCGTAGTCGCGGAACAGGTAGTCACCCGCCACCGCGTTGGCACCGCCGGCACTCGGCAGCATGAAGCTGAAGTGAGC  >  NC_002947/3954448‑3954743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.