New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1783477 =83 (1.140)5 (0.070) 4/234 NT 6.3% coding (642/2703 nt) glnD uridylyltransferase
?NC_002947 1783499 = 71 (1.030)coding (620/2703 nt) glnD uridylyltransferase

Only 100 of 102 total aligned reads displayed.

GAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGGCGCAAGGCCTCGGGGCCGGCGATGGT  >  NC_002947/1783352‑1783644
                                                                                                                                                     |                                                                                                                                                 
gAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAgg                                                                                                                                                 <  2:785924/150‑1 (MQ=255)
  aGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGtt                                                                                                                                               <  1:558644/150‑1 (MQ=255)
  aGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCACGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGtt                                                                                                                                               <  2:1939116/150‑1 (MQ=255)
    ccAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGt                                                                                                                                             >  2:538549/1‑150 (MQ=255)
          gTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCgg                                                                                                                                       >  2:1387805/1‑150 (MQ=255)
           ttCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGgt                                                                                                                                      >  1:1563387/1‑150 (MQ=255)
               ttCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCg                                                                                                                                  <  2:1811185/150‑1 (MQ=255)
                 ctggaagtcaccagcaccgcgcacatgtggccgagcaaggagttcttcctggccaagcgcgccgaactcaaggcccgccaccacaagtacaacgacaccgagtacaacctcgaacccttgacgttgggttcgAGGTTGTACTCGGTGTCg                                                                                                                                  <  1:771877‑M2/18‑1 (MQ=255)
                 ctcGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGGCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGtt                                                                                                                                <  2:948653/150‑1 (MQ=255)
                  tcGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTg                                                                                                                               >  1:195397/1‑150 (MQ=255)
                     gtcaccagcaccgcgcacatgtggccgagcaaggagttcttcctggccaagcgcgccgaactcaaggcccgccaccacaagtacaacgacaccgagtacaacctCGAACCCTTGACGTT‑‑GGGTTCGa                                                                                                                                                   >  1:1754314‑M1/105‑127 (MQ=255)
                     gtcaccagcaccgcgcacatgtggccgagcaaggagttcttcctggccaagcgcgccgaactcaaggcccgccaccacaagtacaacgacaccgagtacaacctCGAACCCTTGACGTT‑‑GGGTTCGa                                                                                                                                                   <  2:1754314‑M1/23‑1 (MQ=255)
                           aGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTgtgg                                                                                                                      >  2:1696953/1‑150 (MQ=255)
                           aGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTgtgg                                                                                                                      >  1:1712962/1‑150 (MQ=255)
                                   gCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGc                                                                                                              <  1:1387805/150‑1 (MQ=255)
                                      ttCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCtt                                                                                                           >  1:636095/1‑150 (MQ=255)
                                        cGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGa                                                                                                         <  1:1750575/150‑1 (MQ=255)
                                        cGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGa                                                                                                         <  1:1601169/150‑1 (MQ=255)
                                        cGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGa                                                                                                         <  2:313870/150‑1 (MQ=255)
                                             gCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCg                                                                                                    <  1:34/150‑1 (MQ=255)
                                              ccAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCgg                                                                                                   >  2:1660123/1‑150 (MQ=255)
                                                 gTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCg                                                                                                    >  2:63028/1‑146 (MQ=255)
                                                 gTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCg                                                                                                    <  1:63028/146‑1 (MQ=255)
                                                 gTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGgcgc                                                                                                >  1:947831/1‑150 (MQ=255)
                                                 gTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGgcgc                                                                                                <  1:383097/150‑1 (MQ=255)
                                                     gatctggTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCATGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCtt                                                                                            <  2:1232187/145‑1 (MQ=255)
                                                      tgcaGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTg                                                                                           <  1:999498/150‑1 (MQ=255)
                                                         aGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACGTGTGGTGGCGGGCCTTGa                                                                                                         <  2:1118589/133‑1 (MQ=255)
                                                         aGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACGTGTGGTGGCGGGCCTTGa                                                                                                         >  1:1118589/1‑133 (MQ=255)
                                                          ggTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCa                                                                                       <  2:1777119/150‑1 (MQ=255)
                                                          ggTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCa                                                                                       <  2:1777107/150‑1 (MQ=255)
                                                           gTTGAGCGTCCCGTACTGGCGGCGTACCGCCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTgagatc                                                                                      >  1:1232187/1‑145 (MQ=255)
                                                              gAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGgaa                                                                                   <  2:1890046/150‑1 (MQ=255)
                                                              gAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGgaa                                                                                   >  2:526215/1‑150 (MQ=255)
                                                                   tCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAg                                                                                                                                                  >  2:414446/1‑82 (MQ=255)
                                                                   tCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAg                                                                                                                                                  <  1:414446/82‑1 (MQ=255)
                                                                   tCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACt                                                                              >  1:1645950/1‑150 (MQ=255)
                                                                     ccGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGa                                                                                                         <  2:1552633/121‑1 (MQ=255)
                                                                     ccGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGa                                                                                                         >  1:1552633/1‑121 (MQ=255)
                                                                       gcgcgccgaactcaaggcccgccaccacaagtacaacgacaccgagtacaacctCGAACCCTTGACGTT‑‑GGGTTCGa                                                                                                                                                   >  1:328465‑M1/55‑77 (MQ=255)
                                                                       gcgcgccgaactcaaggcccgccaccacaagtacaacgacaccgagtacaacctCGAACCCTTGACGTT‑‑GGGTTCGa                                                                                                                                                   <  2:328465‑M1/23‑1 (MQ=255)
                                                                         aCTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCgg                                                                                                                <  1:1279085/110‑1 (MQ=255)
                                                                         aCTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCgg                                                                                                                >  2:1279085/1‑110 (MQ=255)
                                                                           tGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTc                                                                      <  1:1660123/150‑1 (MQ=255)
                                                                            ggcggcGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCg                                                                     <  1:1696953/150‑1 (MQ=255)
                                                                             gcggcgGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCgg                                                                    <  2:1645950/150‑1 (MQ=255)
                                                                             gcggcgGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCgg                                                                    >  2:684086/1‑150 (MQ=255)
                                                                               ggcggGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTtgt                                                                                                                        <  1:1130131/96‑1 (MQ=255)
                                                                               ggcggGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTtgt                                                                                                                        >  2:1130131/1‑96 (MQ=255)
                                                                                gcggGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCca                                                                 >  2:1346803/1‑150 (MQ=255)
                                                                                        cccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGgc                                                                                                  <  1:1069215/109‑1 (MQ=255)
                                                                                        cccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGgc                                                                                                  >  2:1069215/1‑109 (MQ=255)
                                                                                        cccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTgcg                                                         >  2:1103325/1‑150 (MQ=255)
                                                                                         ccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCa                                                                                       <  1:135667/119‑1 (MQ=255)
                                                                                         ccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCa                                                                                       >  2:135667/1‑119 (MQ=255)
                                                                                         ccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCg                                                                     >  1:1721130/1‑137 (MQ=255)
                                                                                         ccacAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCg                                                                     <  2:1721130/137‑1 (MQ=255)
                                                                                           acaGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCgg                                                      >  1:304447/1‑150 (MQ=255)
                                                                                            caGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGt                                                     <  1:1381287/150‑1 (MQ=255)
                                                                                                  cGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTg                                                                         <  1:441495/124‑1 (MQ=255)
                                                                                                  cGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTg                                                                         >  2:441495/1‑124 (MQ=255)
                                                                                                   gTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTg                                              <  1:684086/150‑1 (MQ=255)
                                                                                                    tCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTtgtg                                                                                                                       <  1:1793602/76‑1 (MQ=255)
                                                                                                    tCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTtgtg                                                                                                                       >  2:1793602/1‑76 (MQ=255)
                                                                                                       ggATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACtt                                          <  1:526215/150‑1 (MQ=255)
                                                                                                          tGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGcc                                                                                        <  2:776324/101‑1 (MQ=255)
                                                                                                          tGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCa                                       <  1:538549/150‑1 (MQ=255)
                                                                                                          tGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCa                                       <  2:1563387/150‑1 (MQ=255)
                                                                                                           cgacaccgagtacaacctCGAACCCA‑‑ACGTCAAGGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAg                                      <  1:771877‑M1/132‑1 (MQ=255)
                                                                                                              aCGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTgg                                                >  1:1688550/1‑137 (MQ=255)
                                                                                                              aCGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTgg                                                <  2:1688550/137‑1 (MQ=255)
                                                                                                              aCGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCAt                                   >  1:1499307/1‑150 (MQ=255)
                                                                                                              aCGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCAt                                   <  1:1346803/150‑1 (MQ=255)
                                                                                                                gCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATgc                                 >  2:726367/1‑150 (MQ=255)
                                                                                                                   ggCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCt                              <  1:1103325/150‑1 (MQ=255)
                                                                                                                       aCCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCtt                                                                                                           <  1:1151654/69‑1 (MQ=255)
                                                                                                                       aCCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCtt                                                                                                           >  2:1151654/1‑69 (MQ=255)
                                                                                                                       aCCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGgcg                          >  2:1597156/1‑150 (MQ=255)
                                                                                                                         cTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCtt                                                                                                           >  2:1562929/1‑67 (MQ=255)
                                                                                                                         cTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCtt                                                                                                           <  1:1562929/67‑1 (MQ=255)
                                                                                                                              tcgaacccaacgtcaagggttcgAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGgcgcgc                                                                                              <  2:328465‑M2/54‑1 (MQ=255)
                                                                                                                              tcgaacccaacgtcaagggttcgAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGgcgcgc                                                                                              >  1:328465‑M2/24‑77 (MQ=255)
                                                                                                                              tcgaacccaacgtcaagggttcgAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGAc                                            <  2:1754314‑M2/104‑1 (MQ=255)
                                                                                                                              tcgaacccaacgtcaagggttcgAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGAc                                            >  1:1754314‑M2/24‑127 (MQ=255)
                                                                                                                                  CCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAAc                                                                               <  1:769833‑M1/86‑1 (MQ=255)
                                                                                                                                  CCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAAc                                                                               >  2:769833‑M1/1‑86 (MQ=255)
                                                                                                                                  CCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGTTGACTTCCAGCATGCGCTGGCGCAAGGCCTCgg               <  1:1379520‑M1/150‑1 (MQ=255)
                                                                                                                                   CTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCt                                                                           <  2:195363‑M1/89‑1 (MQ=255)
                                                                                                                                   CTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCt                                                                           >  1:195363‑M1/1‑89 (MQ=255)
                                                                                                                                   CTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCAGCCACATGCGCGTGGAGGTCGTGACTATCGCCATGCGCTGACGAAAGGCCTTggg              <  2:510682‑M1/150‑1 (MQ=255)
                                                                                                                                       aCGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGCGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGa                                             <  1:185762/115‑1 (MQ=255)
                                                                                                                                       aCGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGCGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGa                                             >  2:185762/1‑115 (MQ=255)
                                                                                                                                        cGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGGCGCAAGGCCTCGGGGCCgg         <  1:721356/150‑1 (MQ=255)
                                                                                                                                        cGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGGCGCAAGGCCTCGGGGCCgg         <  1:733238/150‑1 (MQ=255)
                                                                                                                                         gTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGGCGCAAGGCCTCGGGGCCGGc        >  1:182351/1‑150 (MQ=255)
                                                                                                                                          tt‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGGCGCAAGGCCTCGGGGCCGGCg       >  2:28285/1‑150 (MQ=255)
                                                                                                                                               ggttcgAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGGCGCAAGGCCTCGGGGCCGGCGATg    <  1:28285‑M2/144‑1 (MQ=255)
                                                                                                                                               ggttcgAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGGCGCAAGGCCTCGGGGCCGGCGATg    <  2:1499307‑M2/144‑1 (MQ=255)
                                                                                                                                               ggttcgAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGGCGCAAGGCCTCGGGGCCGGCGATg    >  1:902708‑M2/7‑150 (MQ=255)
                                                                                                                                                 ttcgAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGGCGCAAGGCCTCGGGGCCGGCGATGGt  >  2:638954‑M2/5‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
GAAGCCAGCAGTTCATTCTCGCTTTCCAGCAAGAAGCCTTCGCCGGCCAGTGCATGCAGGTTGAGCGTCCCGTACTGGCGGCGGGCCACCCACAGGACCGTCTGGATGTCACGCAGGCCACCTGGCGAACCCTTGACGTT‑‑GGGTTCGAGGTTGTACTCGGTGTCGTTGTACTTGTGGTGGCGGGCCTTGAGTTCGGCGCGCTTGGCCAGGAAGAACTCCTTGCTCGGCCACATGTGCGCGGTGCTGGTGACTTCCAGCATGCGCTGGCGCAAGGCCTCGGGGCCGGCGATGGT  >  NC_002947/1783352‑1783644

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.