New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 319511843 (0.590)4 (0.060) 4/242 NT 9.4% coding (992/1185 nt) dhaT 1,3‑propanediol dehydrogenase
?NC_002947 = 3195135 35 (0.490)coding (975/1185 nt) dhaT 1,3‑propanediol dehydrogenase

TGCTGGCGTCCGAGAAGTTCTGCTTGGACTTCTCGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAGGAAGATCGCGTTGCCCACACCGTGGGGCGTGTCGTA  >  NC_002947/3194993‑3195269
                                                                                                                                              |                                                                                                                                      
tGCTGGCGTCCGAGAAGTTCTGCTTGGACTTCTCGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCg                                                                                                                                 <  1:1861788/150‑1 (MQ=255)
       gTCCGAGAAGTTCTGCTTGGACTCCTCGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCAAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAg                                                                                                                          >  2:1820077/1‑150 (MQ=255)
            agaAGTTCTGCTTGGACTTCTCGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTgg                                                                                                                     <  1:719539/150‑1 (MQ=255)
                 ttCTGCTTGGACTTCTCGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCAGCGACCGGAGACAGCGTGGGGTCg                                                                                                                >  2:643089/1‑150 (MQ=255)
                       ttGGACTTCTCGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATcccc                                                                                                          >  2:836018/1‑150 (MQ=255)
                       ttGGACTTCTCGGCAATGGACGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACACATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGGCGATcccc                                                                                                          >  2:1762034/1‑150 (MQ=255)
                         ggACTTCTCGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCa                                                                                                                                        >  1:268527/1‑118 (MQ=255)
                         ggACTTCTCGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCa                                                                                                                                        <  2:268527/118‑1 (MQ=255)
                         ggACTTCTCGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATcc                                                                                                            <  1:1515681/146‑1 (MQ=255)
                         ggACTTCTCGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATcc                                                                                                            >  2:1515681/1‑146 (MQ=255)
                          ttcttCTCGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGATGCCGCCGAGGCCGCCGtcggccatctgttccagatgagcaaggacctgg                                                                                                       >  2:1008939‑M2/3‑117 (MQ=255)
                               ctcGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTa                                                                                                  <  2:821990/150‑1 (MQ=255)
                                tcGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGAAGGACGACGGCGGCCTCGGCGGCATCGAGCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAg                                                                                                 <  2:662930/150‑1 (MQ=255)
                                       tGGTCGGAAAGTCTTCCTCGCGCACACCCTTTACCTCGGCGCGGGGGCGGCTGCTTGGGCCAGCACTGGGCTGGACCAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCt                                                                                          <  1:1197727/150‑1 (MQ=255)
                                                 gTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCg                                                                                >  1:567661/1‑150 (MQ=255)
                                                  tCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCgg                                                                               >  2:172489/1‑150 (MQ=255)
                                                                  ccTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGAc                                                                                                                                   >  1:256879/1‑82 (MQ=255)
                                                                  ccTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGAc                                                                                                                                   <  2:256879/82‑1 (MQ=255)
                                                                  ccTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCAc                                                               >  1:318847/1‑150 (MQ=255)
                                                                  ccTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCAc                                                               >  2:699420/1‑150 (MQ=255)
                                                                          tCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAGCAGATGGCCGACGGCGGCCTCGGCGGCATCGACCg                                                                                                                                 <  2:910098/76‑1 (MQ=255)
                                                                          tCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAGCAGATGGCCGACGGCGGCCTCGGCGGCATCGACCg                                                                                                                                 >  1:910098/1‑76 (MQ=255)
                                                                          tCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATccc                                                                                                           >  1:55370/1‑98 (MQ=255)
                                                                          tCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATccc                                                                                                           <  2:55370/98‑1 (MQ=255)
                                                                                       ggATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAgg                                          >  1:1033528/1‑150 (MQ=255)
                                                                                          ggCCCAGGGCCTTGCCCATCTGGAACAGCTGGCCCACGGAGGCCGCTGTGGCATCGACCGGAGACAGCGTGGGGTCGAGCCCCACCGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCa                                       <  2:318847/149‑1 (MQ=255)
                                                                                          ctcccagGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCAtcggccatctgttccagatgagcaaggccctgggcatcccccgcttcgccgtggttagtggtgtgcgcgaggaagacttcccgaccattgccgagaa                                       >  1:1008939‑M2/3‑53 (MQ=255)
                                                                                           gccaaGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAg                                      <  1:1820077/146‑1 (MQ=255)
                                                                                             ccAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGga                                                                                                                               >  1:804268/1‑59 (MQ=255)
                                                                                             ccAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGga                                                                                                                               <  2:804268/59‑1 (MQ=255)
                                                                                                 gTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAGGAAGAt                                >  1:728438/1‑150 (MQ=255)
                                                                                                  tCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAGGAAGATc                               >  1:679793/1‑150 (MQ=255)
                                                                                                       gCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCAAACACGCAGGGCAGGAAGATCGCGtt                          <  2:567661/150‑1 (MQ=255)
                                                                                                         tCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAGGAAGATCGCGTTGc                        <  2:728438/150‑1 (MQ=255)
                                                                                                              tGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAGGAAGATCGCGTTGCCcaca                   >  1:519882/1‑150 (MQ=255)
                                                                                                               ggAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGAc                                                                             >  2:186712/1‑91 (MQ=255)
                                                                                                               ggAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGAc                                                                             <  1:186712/91‑1 (MQ=255)
                                                                                                               ggAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAGGAAGATCGCGTTGCCCacac                  >  2:15313/1‑150 (MQ=255)
                                                                                                                    aGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAGGAAGATCGCGTTGCCCACACCGTgg             <  1:15313/150‑1 (MQ=255)
                                                                                                                    aGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAGGAAGATCGCGTTGCCCACACCGTgg             >  1:1360429/1‑150 (MQ=255)
                                                                                                                       tGGCCGACGGCGGCCTCGGCGGCAtcggccatctgttccagatgagcaaggacctgggcatcccccgcttcgccgaggtcaagggtgtgcgcgaggaa                                                              >  2:971631‑M2/1‑24 (MQ=255)
                                                                                                                       tGGCCGACGGCGGCCTCGGCGGCAtcggccatctgttccagatgagcaaggacctgggcatcccccgcttcgccgaggtcaagggtgtgcgcgaggaa                                                              <  1:971631‑M2/98‑75 (MQ=255)
                                                                                                                       tGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAGGAAGATCGCGTTGCCCACACCGTGGGGc          <  1:836018/150‑1 (MQ=255)
                                                                                                                          ccGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAGGAAGATCGCGTTGCCCACACCGTGCGGCgtg       <  2:519882/150‑1 (MQ=255)
                                                                                                                           cGACGGCGGCCTCGGCGGCATCGACCCGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAGGAAGATCGCGTTGCCCACACCGTGGGGCgtgt      <  1:662036/150‑1 (MQ=255)
                                                                                                                               ggcggcCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAGGAAGATCGCGTTGCCCACACCGTGGGGCGTGTCGTa  <  1:172489/150‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                      
TGCTGGCGTCCGAGAAGTTCTGCTTGGACTTCTCGGCAATGGTCGGGAAGTCTTCCTCGCGCACACCCTTGACCTCGGCGAAGCGGGGGATGCCCAGGTCCTTGCTCATCTGGAACAGATGGCCGACGGCGGCCTCGGCGGCATCGACCGGAGACAGCGTGGGGTCGATCCCCAACGCGTAGGCGACCTGGGCATGGCGGACGATATCGGCATCACGGTTGTGACCGAACACGAAGGGCAGGAAGATCGCGTTGCCCACACCGTGGGGCGTGTCGTA  >  NC_002947/3194993‑3195269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.