New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3951114 =	90 (1.230)	4 (0.070)	4/192	NT	6.8%	intergenic (‑34/+161)	PP_3486/PP_3487	cytochrome c/hypothetical protein
	?	NC_002947	3951230 =	40 (0.710)					intergenic (‑150/+45)	PP_3486/PP_3487	cytochrome c/hypothetical protein

CAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGTTTACCTGCAACATCAC  >  NC_002947/3951083‑3951378                                                                                                                                                     |                                                                                                                                                     caAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACaaaa                                                                                                                                                    >  2:793161/1‑150 (MQ=255)   agggcGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTCCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGGCGCAAGGCCGCTCCCACAAAAGc                                                                                                                                                  <  2:1398869/146‑1 (MQ=255)   aGCAGGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGc                                                                                                                                                  <  1:1457519/150‑1 (MQ=255)   aGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGc                                                                                                                                                  <  1:1453746/150‑1 (MQ=255)     cACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGGCGCGAAAGGGCTGCGGAGCAGCACGGGCAGAGACAGCTCA‑AGCGCCGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCgg                                                                                                                                                >  1:724196/1‑150 (MQ=38)       cGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCACCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGAt                                                                                                                                              <  1:288138/150‑1 (MQ=255)        gCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATg                                                                                                                                             >  1:987432/1‑150 (MQ=255)        gCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATg                                                                                                                                             >  1:1804255/1‑150 (MQ=255)         cAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGc                                                                                                                                            <  1:1832077/150‑1 (MQ=255)             tAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAACCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAACGGATGCcaca                                                                                                                                        >  1:1767733/1‑150 (MQ=255)               aGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACaga                                                                                                                                      <  2:1066315/150‑1 (MQ=255)               aGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCATCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGGAGGCCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGGTGCCACAAAAGCGGATGCCACaga                                                                                                                                      >  1:288516/1‑150 (MQ=39)                gCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCCTCGAGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACagag                                                                                                                                     <  1:645590/150‑1 (MQ=255)                gCCATATCGCAAGCCCGGTGGGAGCGGCCTGGCGTGGCGAAAGGGCTGCGCAGCAGCCCCGGAAGTGCCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCGCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACagag                                                                                                                                     <  2:724196/150‑1 (MQ=38)                gCCAGATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGAAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGTAGATGCTGCTCGGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACagag                                                                                                                                     <  2:1718679/150‑1 (MQ=37)                  cATGTCGCAAGCCGTGTGGGAGCGGCCGTGCGTCGGGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCGCA‑AGCGCAGAAAGAGGTGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGc                                                                                                                                   <  1:912344/150‑1 (MQ=38)                   atatCGCAAGCCCCGTGGGAGGGGCCTTGCGTCGCGAAAGGGCTGCGCAGAAGCCCCGGCACTCG‑TGATCATAGCGCAGAAAGAGGGTAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGcc                                                                                                                                  <  1:612454/150‑1 (MQ=37)                       cGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCCGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCCAGCTCCTTTCGCGGCGCAAGGCCGCCCCCACAAAAGCGGCAGCCACAGAGGCCGAtt                                                                                                                              >  2:1908768/1‑150 (MQ=38)                         cAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTcc                                                                                                                            >  1:386598/1‑150 (MQ=255)                          aatcccTGTGGGTGCGGCCTTGCGTCGCGAAAGGGCTGCGTAGTAGCCCCGGCAGTGGCAGCTCA‑AGTGCAGAAAGTGGGTTGCTCTGTGCGCTCTTTTCGCGACGCAATGCCGCTCCTACAAAAGCGGATGCCACAGAGGCCAATTccc                                                                                                                           <  2:439089/147‑1 (MQ=255)                          aaGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTccc                                                                                                                           <  2:386598/150‑1 (MQ=255)                          aaGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTccc                                                                                                                           <  1:793161/150‑1 (MQ=255)                            gCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCa                                                                                                                         >  1:1073618/1‑150 (MQ=255)                                  TGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGGGGGATACTCGGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAggcggc                                                                                                                   >  1:723836‑M1/1‑150 (MQ=255)                                       GCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAg                                                                                                                                                   <  2:1358602‑M1/113‑1 (MQ=255)                                       GCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAg                                                                                                                                                   >  1:1358602‑M1/1‑113 (MQ=255)                                        CGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGa                                                                                                             >  2:1908538‑M1/1‑150 (MQ=255)                                         GGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGAt                                                                                                            <  1:504447‑M1/150‑1 (MQ=255)                                           CCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATAc                                                                                                          <  2:1481073‑M1/150‑1 (MQ=255)                                            CTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACt                                                                                                         <  2:1883454‑M1/150‑1 (MQ=255)                                              ttgcgtcgcgaaaggagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTc                                                                                                        >  1:61605‑M2/104‑150 (MQ=255)                                               ggGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGAATAATTTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCac                                                                                                      >  1:1556845‑M1/3‑150 (MQ=255)                                               GCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCac                                                                                                      >  1:531863‑M1/1‑150 (MQ=255)                                               GCGTCGCCAAAGGGTTGCGCAGCAGACCCGGCAGTGGCAGCTCA‑AGTGCAGAAAGAGGGCAGCGCTGCGGCTTCCTTCCGCGCCGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCac                                                                                                      >  2:706358‑M1/1‑150 (MQ=255)                                                  gtcgcgaaaggagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAg                                                                                                                        >  1:1547454‑M2/100‑130 (MQ=255)                                                  gtcgcgaaaggagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAg                                                                                                                        <  2:1547454‑M2/31‑1 (MQ=255)                                                  TCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCaccga                                                                                                   <  1:819163‑M1/150‑1 (MQ=255)                                                   CGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGATCA‑AGCCAAGAAAGAGGGGAGCCCTCCGCGCTCCTTTCGCGCCGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCaccgac                                                                                                  >  2:288516‑M1/1‑150 (MQ=255)                                                            gCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGaaa                                                                                                           >  1:813731/1‑130 (MQ=255)                                                            gCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATa                                                                                                           <  2:813731/132‑1 (MQ=255)                                                                cgcAGCAGCCCGGGCAGTGGCAGCTCA‑AGCGCAGAAAGGGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTg                                                                                     <  1:1908768/150‑1 (MQ=255)                                                                 gcagcaGCCCCGGCAGTGGCAGTTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTgg                                                                                    <  2:969106/150‑1 (MQ=255)                                                                 gcagcaGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTgg                                                                                    <  2:684996/150‑1 (MQ=255)                                                                 gcagcaGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTgg                                                                                    <  1:1869718/150‑1 (MQ=255)                                                                   agcagcCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGt                                                                                  >  1:1164502/1‑150 (MQ=255)                                                                         cccGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAg                                                                            >  1:413969/1‑150 (MQ=255)                                                                          ccGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGc                                                                           >  2:127846/1‑150 (MQ=255)                                                                           cGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCCCCGACCGGCCAGCGGCTGGGTCAACAGCt                                                                          >  1:369503/1‑150 (MQ=255)                                                                            cctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCt                                                                          <  2:61605‑M2/77‑1 (MQ=255)                                                                                   gCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATgcgc                                                                  >  1:1194409/1‑150 (MQ=255)                                                                                   gCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATgcgc                                                                  >  1:1920530/1‑150 (MQ=255)                                                                                   gCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATgcgc                                                                  >  1:271619/1‑150 (MQ=255)                                                                                     aGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTg                                                                <  2:1164502/150‑1 (MQ=255)                                                                                     aGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTg                                                                <  1:1713059/150‑1 (MQ=255)                                                                                       cTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTggg                                                              >  2:301933/1‑150 (MQ=255)                                                                                        tCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCTACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCGCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCAtgggctgggc                                                             >  1:1852737/1‑150 (MQ=255)                                                                                             gcgcAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATc                                                         <  2:819163/150‑1 (MQ=255)                                                                                                     agagGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCaa                                                                               >  1:566023/1‑120 (MQ=255)                                                                                                     agagGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCaa                                                                               <  2:566023/120‑1 (MQ=255)                                                                                                           gAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGc                                           >  2:1071934/1‑150 (MQ=255)                                                                                                                       cTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAAt                               <  2:413969/150‑1 (MQ=255)                                                                                                                        tCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATc                              >  1:1558061/1‑150 (MQ=255)                                                                                                                        tCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATc                              >  1:778853/1‑150 (MQ=255)                                                                                                                           tttcgcgacgcaaggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTg                           >  1:582346‑M2/27‑150 (MQ=255)                                                                                                                           tttcgcgacgcaaggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTg                           >  2:1097210‑M2/27‑150 (MQ=255)                                                                                                                            ttcgcgacgcaaggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGc                          <  2:1879942‑M2/125‑1 (MQ=255)                                                                                                                               gcgacgcaaggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTcc                       >  1:657864‑M2/23‑150 (MQ=255)                                                                                                                                    gcaaggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGt                  >  2:1842122‑M2/18‑150 (MQ=255)                                                                                                                                     caaggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGtt                 <  1:1670405‑M2/134‑1 (MQ=255)                                                                                                                                      aaggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGaa                                >  1:1376595‑M2/16‑134 (MQ=255)                                                                                                                                      aaggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGaa                                <  2:1376595‑M2/119‑1 (MQ=255)                                                                                                                                       aggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGTTTa               <  1:301933‑M2/136‑1 (MQ=255)                                                                                                                                        ggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGTTTAc              <  1:1097210‑M2/137‑1 (MQ=255)                                                                                                                                        ggccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGTTTAc              <  2:1920530‑M2/137‑1 (MQ=255)                                                                                                                                          ccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCAt                                                                      <  2:1751188‑M2/81‑1 (MQ=255)                                                                                                                                          ccgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCAt                                                                      >  1:1751188‑M2/12‑92 (MQ=255)                                                                                                                                          ccgctcccacaAAAGCGGATGCCACAGAGGCCAATCCTCCAGTCGGCCCATGATACTCACCGACCGGCCAGCAGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGAGAATCTTGCTCCAGCGTTTACCt            <  1:127846‑M2/139‑1 (MQ=255)                                                                                                                                           cgctcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGTTTACCTg           <  2:1767733‑M2/140‑1 (MQ=255)                                                                                                                                              tcccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGTTTACCTGCaa        <  2:1073618‑M2/143‑1 (MQ=255)                                                                                                                                              ccccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGTTTACCTGCaa        <  2:987432‑M2/143‑1 (MQ=255)                                                                                                                                               cccacaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGTTCTCGTTGCTTCCGGGCGAATCTTGCTCCAGCGTTTACCTGCAAc       <  2:1341598‑M2/144‑1 (MQ=255)                                                                                                                                                  acaAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGTTTACCTGCAACATc    >  1:1935161‑M2/4‑150 (MQ=255)                                                                                                                                                    aAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCAGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGTTTACCTGCAACATCAc  >  1:668868‑M2/2‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCA‑AGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGTTTACCTGCAACATCAC  >  NC_002947/3951083‑3951378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.