New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5237563 =	91 (1.250)	4 (0.060)	4/230	NT	5.1%	coding (346/348 nt)	PP_5700	hypothetical protein
	?	NC_002947	5237620 =	64 (0.950)					coding (32/387 nt)	PP_4614	hypothetical protein

GCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTGAACCTGAGCATTGCCAACCTCGACGGCAGCA  >  NC_002947/5237476‑5237769                                                                                                                                                 |                                                                                                                                                        ttcgttcgaatgggttgttcatggtcttgcttctgcggtgagtgatgcagaggttgaccggacgttcgcatgttggttcagcgccatTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGgcg                                                                                                                                                    >  2:1887164‑M1/88‑150 (MQ=255) gccACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGgcg                                                                                                                                                    <  1:1327722/150‑1 (MQ=255) gccACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGgcg                                                                                                                                                    >  2:391422/1‑150 (MQ=255)  ccaccaAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGgcgc                                                                                                                                                   <  2:1634304/150‑1 (MQ=255)  ccaccaAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGgcgc                                                                                                                                                   <  2:1701480/150‑1 (MQ=255)      caAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGaa                                                                                                                                               <  2:398264/150‑1 (MQ=255)      caAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCAGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGaa                                                                                                                                               <  1:1692351/150‑1 (MQ=255)        aGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGCCCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCt                                                                                                                                                  <  1:437093/145‑1 (MQ=255)        aGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCt                                                                                                                                                  >  2:437093/1‑145 (MQ=255)        aGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAAcc                                                                                                                                             >  1:830710/1‑150 (MQ=255)          cTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGCGTGACCCGGACGCCGGATCGGCAATCCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGACCCaa                                                                                                                                           <  2:554758/150‑1 (MQ=255)          cTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCaa                                                                                                                                           >  1:468353/1‑150 (MQ=255)            cAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑a                                                                                                                                        >  2:977182/1‑150 (MQ=255)             aaTCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAGACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑At                                                                                                                                       <  2:462032/150‑1 (MQ=255)             aaTCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑At                                                                                                                                       >  2:969000/1‑150 (MQ=255)               tCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCGTGGTCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCACTGGCGCTGAGCCAAC‑ATGc                                                                                                                                     <  2:650755/150‑1 (MQ=255)               tCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGc                                                                                                                                     >  2:133496/1‑150 (MQ=255)               tCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGc                                                                                                                                     <  2:1820245/150‑1 (MQ=255)                 aCGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGa                                                                                                                                   <  1:1146337/150‑1 (MQ=255)                 aCGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGa                                                                                                                                   <  1:977182/150‑1 (MQ=255)                  cgcgCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCAGGTCCGATCTTCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGaa                                                                                                                                  <  1:612102/150‑1 (MQ=255)                   gcgcTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAAc                                                                                                                                 <  1:969000/150‑1 (MQ=255)                         gAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAAACAAC‑ATGCGAACGTCCgg                                                                                                                           >  2:1865767/1‑150 (MQ=255)                              cTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAAc                                                                                                                      <  2:468353/150‑1 (MQ=255)                              cTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑AGGCGAACGTCCGGTCAAc                                                                                                                      <  2:1339663/150‑1 (MQ=255)                                  tACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACctc‑t                                                                                                                 <  2:55257/150‑1 (MQ=255)                                        aaGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCg                                                                                                                            <  2:1218281/134‑1 (MQ=255)                                        aaGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCg                                                                                                                            >  1:1218281/1‑134 (MQ=255)                                           tgatgcagaggttgaccggacgttcgcatgttggttcagcgccatTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATg                                                                                                                                                       <  2:512572‑M1/60‑1 (MQ=255)                                           tgatgcagaggttgaccggacgttcgcatgttggttcagcgccatTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATg                                                                                                                                                       >  1:512572‑M1/46‑105 (MQ=255)                                           cTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCt                                                                                                                                                  >  2:537898/1‑110 (MQ=255)                                           cTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCt                                                                                                                                                  <  1:537898/110‑1 (MQ=255)                                                  gcaAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAg                                                                                                 >  1:146281/1‑150 (MQ=255)                                                    aaGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGaa                                                                                               <  2:330130/150‑1 (MQ=255)                                                       cgcgGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCa                                                                                            >  2:1710301/1‑150 (MQ=255)                                                          ggcgCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGa                                                                                         >  1:1468364/1‑150 (MQ=255)                                                           gcgcCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGAc                                                                                        <  1:391422/150‑1 (MQ=255)                                                              ccTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCAt                                                                                     <  2:142751/150‑1 (MQ=255)                                                                    aaCTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGaacaa                                                                               <  1:1710301/150‑1 (MQ=255)                                                                      cTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCa                                                                                                              <  2:1685852/117‑1 (MQ=255)                                                                      cTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCa                                                                                                              >  1:1685852/1‑117 (MQ=255)                                                                              cccGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTcgaa                                                                     >  2:22254/1‑150 (MQ=255)                                                                               ccGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCAtcactca                                                                                                       <  2:322331/115‑1 (MQ=255)                                                                               ccGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCAtcactca                                                                                                       >  1:322331/1‑115 (MQ=255)                                                                                cGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCAtca                                                                                                           <  2:6474/110‑1 (MQ=255)                                                                                cGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCAtca                                                                                                           >  1:6474/1‑110 (MQ=255)                                                                                  cgccattgatcggcacaaacgaaaacgcccggctcaaggccgggcgttttgcattgccgatcaATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTcgaacgaa                                                                 >  2:1887164‑M2/64‑150 (MQ=255)                                                                                     cattgatcggcacaaacgaaaacgcccggctcaaggccgggcgttttgcattgccgatcaATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCAtca                                                                                                           >  1:512572‑M2/61‑105 (MQ=255)                                                                                     cattgatcggcacaaacgaaaacgcccggctcaaggccgggcgttttgcattgccgatcaATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCAtca                                                                                                           <  2:512572‑M2/45‑1 (MQ=255)                                                                                       cTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTcgaa                                                                     >  1:1001120/1‑141 (MQ=255)                                                                                       cTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTcgaa                                                                     <  2:1001120/141‑1 (MQ=255)                                                                                       cTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGt                                                            >  2:1994/1‑150 (MQ=255)                                                                                          ATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGtgct                                                         <  1:1526437‑M1/150‑1 (MQ=255)                                                                                          ATCGGCAATGCAAAACGCCCGGCCTGGAGCCGGGCGTTTTCGTTTGTGACGATCAATGGCCATCAAGTGGT‑ACGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCATAAGCAAGACCATGAACAACCCATTCGAACGCATCAGtgct                                                         >  1:1574979‑M1/1‑150 (MQ=255)                                                                                             GGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCAtca                                                                                                           >  2:1462686‑M1/1‑97 (MQ=255)                                                                                             GGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCAtca                                                                                                           <  1:1462686‑M1/97‑1 (MQ=255)                                                                                               CAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCAtt                                                    <  2:1125173‑M1/150‑1 (MQ=255)                                                                                                aaacgaaaacgcccggctcaaggccgggcgttttcgtttgtgcagatcaATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTc                                                   <  1:419630‑M2/101‑1 (MQ=255)                                                                                                AATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTc                                                   >  1:133496‑M1/1‑150 (MQ=255)                                                                                                  tGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGc                                                 >  1:1076645/1‑150 (MQ=255)                                                                                                  tGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGc                                                 <  1:1865767/150‑1 (MQ=255)                                                                                                  tGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGc                                                 >  1:1076653/1‑150 (MQ=255)                                                                                                       aaCGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGGAGAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCg                                            >  1:1556866/1‑150 (MQ=255)                                                                                                       aaCGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCg                                            >  1:902153/1‑150 (MQ=255)                                                                                                          gCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAGC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAAt                                         >  2:1931054/1‑150 (MQ=255)                                                                                                              ggCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCg                                     >  2:757172/1‑150 (MQ=255)                                                                                                                ccTTGAGCCGGGCGTTTTCGTTTGTGCCGATCGATGTCGCTG‑ACCAACAACGCGCCCGTGCCAAC‑GCCTCAATGGTCACTCACCGCAGAAGCAAGACCATGACCAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCggg                                   <  1:1006490/150‑1 (MQ=255)                                                                                                                 cTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGt                                  <  1:1125173/150‑1 (MQ=255)                                                                                                                 cTTGAGCCGGGCGCTTTCGTTTGTGCCGATCAATGGCGCTGGACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGt                                  <  2:875914/150‑1 (MQ=255)                                                                                                                     aGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTGAAc                              <  2:830710/150‑1 (MQ=255)                                                                                                                         gggCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTGAACCTGa                          <  2:1556866/150‑1 (MQ=255)                                                                                                                         gggCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTGAACCTGa                          <  2:1526437/150‑1 (MQ=255)                                                                                                                         gggCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTGAACCTGa                          <  2:122979/150‑1 (MQ=255)                                                                                                                          ggCGTTTTCGTGTGTGCCGATCAATGGCGCTGCACCAAT‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTNGAACGAATCNGTGCTGCATTCGCCCCCGAATACCGGGTGAACCTGAg                         <  1:563573/150‑1 (MQ=255)                                                                                                                            cGTTTTCGTTTGTGCCAATCAATGCCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTGAACCTGAGCa                       <  1:1994/150‑1 (MQ=255)                                                                                                                               tttCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGa                                                                                   <  2:1444191/87‑1 (MQ=255)                                                                                                                               tttCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGa                                                                                   >  1:1444191/1‑87 (MQ=255)                                                                                                                                   gTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTGAACCTGAGCATTGCCaa                >  2:1267741/1‑150 (MQ=255)                                                                                                                                   gTTTGTCCCAACCGATTGCGCGGCACCAAC‑ATGCTAACGGCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGACCAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTGAACCTGAGCATTGCCaa                <  2:902153/150‑1 (MQ=255)                                                                                                                                            gatcaATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTGAACCTGAGCATTGACAACCTAGAAgg       >  2:414600‑M2/6‑150 (MQ=255)                                                                                                                                             atcaATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTGAACCTGAGCATTGCCAACCTCGAcggt      <  2:1329072‑M2/146‑2 (MQ=255)                                                                                                                                                 aTGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTGAACCTGAGCATTGCCAACCTCGACGgcagca  <  2:1468364/150‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                        GCCACCAAGCTCAATCACGCGCTGGAGCACTTCTACGGCAAGCTGCGCAGCAAGCGCGGCGCCTTGGAACTGAGTGACCCGGACGCCTGATCGGCAATGCAAAACGCCCGGCCTTGAGCCGGGCGTTTTCGTTTGTGCCGATCAATGGCGCTGAACCAAC‑ATGCGAACGTCCGGTCAACCTC‑TGCATCACTCACCGCAGAAGCAAGACCATGAACAACCCATTCGAACGAATCAGTGCTGCATTCGCCCCCGAATACCGGGTGAACCTGAGCATTGCCAACCTCGACGGCAGCA  >  NC_002947/5237476‑5237769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.