New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5405650 =	69 (0.950)	6 (0.080)	6/240	NT	8.3%	coding (368/660 nt)	PP_4749	amino acid ABC transporter permease
	?	NC_002947	5405682 =	66 (0.930)					coding (336/660 nt)	PP_4749	amino acid ABC transporter permease

AGCGACGAGGCCTGGAACATCATGATCGAGAACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGAAATACTGCAGCAGGATCAACGCCGGTGCGCCAC  >  NC_002947/5405533‑5405830                                                                                                                                                      |                                                                                                                                                     aGCGACGAGGCCTGGAACATCATGATCGAGAACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGAc                                                                                                                                                      <  2:481344/150‑1 (MQ=255)      ctttggcctgcccagcgtcaacctcaccctgacctcgttctgggctgctgcgctggccatggagtactgcacggccgcctacaccagtgaaatcattcgcggtggcatcgagtctgtgtccgcggggcaaaccgaggccgccgaCTCGAt                                                                                                                                                 <  2:1191175‑M2/6‑1 (MQ=255)       gaGGCCTGGAACATCCCGCGCCGTAACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATg                                                                                                                                                <  1:592824/150‑1 (MQ=255)            cTGGAACATCATGATCGAGAACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCAcc                                                                                                                                           >  1:1651233/1‑150 (MQ=255)                 ccagcgtcaacctcaccctgacctcgttctgggctgctgcgctggccatggcggagtgcacggccgcctacaccagtgaaatcattcgcggtggcatcgagtcggtggcctcggtttgccccgcggccaccgaCTCGATGCCACCGCGaa                                                                                                                                      <  2:592332‑M2/17‑1 (MQ=255)                  catcatGATCGAGAACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAAt                                                                                                                                     >  2:1128988/1‑150 (MQ=255)                      atGATCGAGAACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGAtt                                                                                                                                 >  1:1182204/1‑150 (MQ=255)                       tGATCGAGAACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGAttt                                                                                                                                >  2:987369/1‑150 (MQ=255)                         aTCGAGAACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTGGATGCCACCGCGAATGATTTCa                                                                                                                              <  1:1325064/150‑1 (MQ=255)                         aTCGAGAACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCa                                                                                                                              <  1:1128988/150‑1 (MQ=255)                          tCGAGAACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGagatcgg                                                                                                                             >  1:1869844/1‑144 (MQ=255)                          tCGAGAACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCAc                                                                                                                             >  1:602042/1‑150 (MQ=255)                             ataaCCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTAGCCGCGATAAGCAGTCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTgg                                                                                                                          >  2:51092/3‑150 (MQ=255)                             agaACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTgg                                                                                                                          >  1:1687020/1‑150 (MQ=255)                              gaACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCTGCCACCGACTCGATGCCACCGCGAATGATTTCACTGgt                                                                                                                         <  2:1839273/150‑1 (MQ=255)                                 ccccAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACcgc                                                                                                                                         >  2:746936/1‑131 (MQ=255)                                 ccccAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACcgc                                                                                                                                         <  1:746936/131‑1 (MQ=255)                                  cccAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAg                                                                                                                     >  1:929510/1‑150 (MQ=255)                                   ccAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAgg                                                                                                                    <  2:1492421/150‑1 (MQ=255)                                    cagcagCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTg                                                                                                                           >  2:1293271/1‑142 (MQ=255)                                    cagcagCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTg                                                                                                                           <  1:1293271/142‑1 (MQ=255)                                    cagcagCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAggc                                                                                                                   <  1:896607/150‑1 (MQ=255)                                    cagcagCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAggc                                                                                                                   >  2:1630825/1‑150 (MQ=255)                                        agcGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGcc                                                                                                               <  2:918514/150‑1 (MQ=255)                                          cGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGc                                                                                                                                               <  1:1342791/116‑1 (MQ=255)                                          cGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGc                                                                                                                                               >  2:1342791/1‑116 (MQ=255)                                           gATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTg                                                                                                            >  2:232937/1‑150 (MQ=255)                                               gCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGAt                                                                                                                                                 >  2:951026/1‑109 (MQ=255)                                               gCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGAt                                                                                                                                                 <  1:951026/109‑1 (MQ=255)                                                 aGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTAc                                                                                                      >  1:195417/1‑150 (MQ=255)                                                     ccACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGGTGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCa                                                                                                  <  2:1656677/150‑1 (MQ=255)                                                              aGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAgcg                                                                                         <  2:1687020/150‑1 (MQ=255)                                                                 ccTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCgcag                                                                                      <  2:195417/150‑1 (MQ=255)                                                                 ccTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCgcag                                                                                      <  1:1630825/150‑1 (MQ=255)                                                                 ccTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCgcag                                                                                      >  1:1518345/1‑150 (MQ=255)                                                                   tGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGgt                                                                                                                         <  2:1092853/113‑1 (MQ=255)                                                                   tGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGgt                                                                                                                         >  1:1092853/1‑113 (MQ=255)                                                                               acaAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATg                                                                                                >  2:1315865/1‑126 (MQ=255)                                                                               acaAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATg                                                                                                <  1:1315865/126‑1 (MQ=255)                                                                               acaAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGcc                                                                                 >  2:123777/1‑141 (MQ=255)                                                                               acaAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGcc                                                                                 <  1:123777/141‑1 (MQ=255)                                                                               acaAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAg                                                                        <  1:987369/150‑1 (MQ=255)                                                                                   agcgcagcgcGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCACCCGTCCAGTAAGCCCTGGCCAGCGCAGCAGCCCAGAACGAGGTCa                                                                    <  1:1013924/150‑1 (MQ=255)                                                                                      gcagcgcGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGAt                                                                                                                                  >  2:58261/1‑85 (MQ=255)                                                                                      gcagcgcGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGAt                                                                                                                                  <  1:58261/85‑1 (MQ=255)                                                                                      gcagcgcGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCGACCGCAGCAGCCCAGAACGAGGTCAggg                                                                 <  1:51092/150‑1 (MQ=255)                                                                                      gcagcgcGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAggg                                                                 <  1:1601319/150‑1 (MQ=255)                                                                                           gcgTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAgg                                                            <  1:870461/150‑1 (MQ=255)                                                                                                gAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTAc                                                                                                      <  1:915460/103‑1 (MQ=255)                                                                                                gAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTAc                                                                                                      >  2:915460/1‑103 (MQ=255)                                                                                                gAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGAc                                                       <  2:929510/150‑1 (MQ=255)                                                                                                  aCCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCa                                                                                                          <  2:1048290/97‑1 (MQ=255)                                                                                                  aCCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCa                                                                                                          >  1:1048290/1‑97 (MQ=255)                                                                                                     ttcgcggtggcatcgagTCGGTGGCCGCGGGGCAAACCGAGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCACTCCGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTgg                                                  <  2:592332‑M1/133‑1 (MQ=255)                                                                                                      gTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGa                                                              >  1:281925/1‑137 (MQ=255)                                                                                                      gTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGa                                                              <  2:281925/137‑1 (MQ=255)                                                                                                      gTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGATggg                                                 <  1:542456/150‑1 (MQ=255)                                                                                                         gAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAg                                              <  1:767910/150‑1 (MQ=255)                                                                                                           ggCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGc                                            <  1:758280/150‑1 (MQ=255)                                                                                                               gATCATTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCaaa                                        <  2:653500/150‑1 (MQ=255)                                                                                                                atcgagTCGGCGGCCTCGGTTTGCCCCGCGGACACAGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACTCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAg                                       <  2:1191175‑M1/144‑1 (MQ=255)                                                                                                                  cACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTa                                     <  2:143205/150‑1 (MQ=255)                                                                                                                  cACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTa                                     >  1:143205/1‑150 (MQ=255)                                                                                                                     ttCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACt                                                                                                                            <  2:1652511/60‑1 (MQ=255)                                                                                                                     ttCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACt                                                                                                                            >  1:1652511/1‑60 (MQ=255)                                                                                                                     ttCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGaa                                  >  1:1720798/1‑150 (MQ=255)                                                                                                                      tcggtggccgcggggcaaaccgaggccgccgaCTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGc                                                                                              <  2:319727‑M2/57‑1 (MQ=255)                                                                                                                      tcggtggccgcggggcaaaccgaggccgccgaCTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGc                                                                                              >  1:319727‑M2/33‑89 (MQ=255)                                                                                                                      TCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAgtagtaa                                 >  1:1934038‑M1/1‑147 (MQ=255)                                                                                                                          tggccgcggggcaaaccgaggccgccgaCTCGATGCCACCGCGAATGATTTCACt                                                                                                                            >  1:1734359‑M2/29‑55 (MQ=255)                                                                                                                          tggccgcggggcaaaccgaggccgccgaCTCGATGCCACCGCGAATGATTTCACt                                                                                                                            <  2:1734359‑M2/27‑1 (MQ=255)                                                                                                                             ccTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGAAATACTgca                          <  2:1651233/150‑1 (MQ=255)                                                                                                                                   tttGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGAAATACTGCAGCAGGa                    <  2:472912/150‑1 (MQ=255)                                                                                                                                       ccccGCGGCCACCGACTAGCAGCCACAGTAAATCCATTCACGTGTGTATGCGGGCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGAAATACTGCAGCAGGATCaa                <  2:1182204/150‑1 (MQ=255)                                                                                                                                        cccGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCa                                                                    >  1:24017/1‑97 (MQ=255)                                                                                                                                        cccGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCa                                                                    <  2:24017/97‑1 (MQ=255)                                                                                                                                               ccACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGAAATACTGCAGCAGGATCaa                >  2:793457/1‑142 (MQ=255)                                                                                                                                               ccACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGAAATACTGCAGCAGGATCaa                <  1:793457/142‑1 (MQ=255)                                                                                                                                               ccACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGAAATACTGCAGCAGGATCAACGCCGGTg        >  2:1491710/1‑150 (MQ=255)                                                                                                                                                 aCCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGAAATACt                             >  1:722210/1‑127 (MQ=255)                                                                                                                                                 aCCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGAAATACt                             <  2:722210/127‑1 (MQ=255)                                                                                                                                                 aCCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTCCAGGACTCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGAAATACTGCAGCAGGATCAACGCCGGTgcg      >  1:49984/1‑150 (MQ=255)                                                                                                                                                  ccgaCTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGAAATACTGCAGCAGGATCAACGCCGGTgcgc     >  2:112865‑M2/5‑150 (MQ=255)                                                                                                                                                     aCTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGAAATACTGCAGCAGGATCAACGCCGGTGCGCCAc  >  1:1613013‑M2/2‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                     AGCGACGAGGCCTGGAACATCATGATCGAGAACCCCAGCAGCGATGGCAGCGCCACCCGCAAGGCCTGAGGCAGGATCACAAAGCGCAGCGCGTCGAACCGGTTGAGGCCGATCACTTCGGCGGCCTCGGTTTGCCCCGCGGCCACCGACTCGATGCCACCGCGAATGATTTCACTGGTGTAGGCGGCCGTGCAGTACGCCATGGCCAGCGCAGCAGCCCAGAACGAGGTCAGGGTGAGGTTGACGCTGGGCAGGCCAAAGTAGAAATACTGCAGCAGGATCAACGCCGGTGCGCCAC  >  NC_002947/5405533‑5405830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.