Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 6,158,423 | C→T | 9.5% | intergenic (+89/‑18) | PP_5401 → / → PP_5739 | hypothetical protein/hypothetical protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 6,158,423 | 0 | C | T | 9.5% | 189.4 / 7.9 | 71 | intergenic (+89/‑18) | PP_5401/PP_5739 | hypothetical protein/hypothetical protein |
Reads supporting (aligned to +/- strand): ref base C (33/31); new base T (3/4); total (36/35) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.10e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
GTCGGGCACGTTCGCAAATTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATAAGCTTCCAGCTCA > NC_002947/6158275‑6158565 | gTCGGGCACGTTCGCAAATTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTgccg‑gccg > 2:1803283/1‑150 (MQ=255) cGGGCACGTTCGCAAATTGCTGGGAGAGATGATTAATAATGGCCCCCCCACTGGCTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCgca < 1:118185/150‑1 (MQ=255) gggCACGTTCGCAAATTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCgcag > 1:179055/1‑150 (MQ=255) gCACGTTCGCAAATTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCACGGTGTACTGATTGATCAGTAAGCGCGACGCTTCACAATCCTTGGAAGAACCCTGCCG‑GCCgcagca > 2:187881/1‑150 (MQ=255) cGCAAATTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCAcggcagg > 1:698742‑M2/1‑143 (MQ=255) cGCAAATTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCAcggcagg > 2:148032‑M2/1‑143 (MQ=255) ttGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGAt > 1:491577/1‑150 (MQ=255) ttGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGAt < 2:1693240/150‑1 (MQ=255) ggAGAGATGATTAATAATGGCCCACCTTTTTACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACt < 1:267114/150‑1 (MQ=255) ggAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACt > 1:300092/1‑150 (MQ=255) agagaTGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTAt < 1:1803283/150‑1 (MQ=255) gatgatTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATggg > 1:816675/1‑150 (MQ=255) atgatTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGt > 1:606136/1‑150 (MQ=255) atgatTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGt > 2:1285163/1‑150 (MQ=255) gatTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCg > 1:1926813/1‑150 (MQ=255) gatTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCg > 1:1172236/1‑150 (MQ=255) atTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGAt < 1:787816/135‑1 (MQ=255) atTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGAt > 2:787816/1‑135 (MQ=255) taataaTGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCTGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAgg < 1:1191544/150‑1 (MQ=255) taataaTGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTACGAGCGCCGCCGAACAATAAATCGCACAACTCGGACA‑GCTCCTGCGCGGCAGGGTCGATGCAACTATGGGTCGAgg < 1:529704/150‑1 (MQ=255) taataaTGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCGTGCTGCGGCggcagggttcttccaaggattgtgcagc < 2:1199754‑M2/149‑29 (MQ=255) taataaTGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCGTGCTGCGGCggcagggttcttccaaggattgtgcagc > 1:1199754‑M2/1‑121 (MQ=255) taataaTGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAgg < 2:1926813/150‑1 (MQ=255) taataaTGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAgg < 2:1101030/150‑1 (MQ=255) taatGGCCCACCTTTTGACTGAGTAGCTACCAGGCGATTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGa > 2:1202560/1‑150 (MQ=255) ggCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCaa < 2:179055/150‑1 (MQ=255) aCCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCata > 1:751797/1‑150 (MQ=255) cTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGa < 1:33218/139‑1 (MQ=255) cTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGa > 2:33218/1‑139 (MQ=255) tACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAAc < 2:1172236/150‑1 (MQ=255) tACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAAc < 2:1061780/150‑1 (MQ=255) aCCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACa > 1:1649333/1‑150 (MQ=255) ccAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACaa > 2:578378/1‑150 (MQ=255) cAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAg > 1:389837/1‑150 (MQ=255) ggCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCg > 2:1156626/1‑150 (MQ=255) gcgcTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGa < 2:606136/150‑1 (MQ=255) tttCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCGTGCTGCGGCggcagggttctt < 2:806176‑M2/93‑13 (MQ=255) tttCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCGTGCTGCGGCggcagggttctt > 1:806176‑M2/1‑81 (MQ=255) gTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCGTGCTGCGGCggcagggttcttccaaggatt < 2:1878836‑M2/96‑22 (MQ=255) gTTCTCAAGGTGTACAGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCGTGCTGCGGCggcagggttcttccaaggatt > 1:1878836‑M2/1‑75 (MQ=255) ttCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGaa < 2:491577/150‑1 (MQ=255) cAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGc < 2:608162/108‑1 (MQ=255) cAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGc > 1:608162/1‑108 (MQ=255) cAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAacaca < 1:1370980/150‑1 (MQ=255) cAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACAAGGCCGAACAAGCGACCTACGCTGAacaca < 1:1508044/150‑1 (MQ=255) ggTGTACTGATTGATCAGTAAGCGCGACGCTTCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTa < 1:187881/150‑1 (MQ=255) gtACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTagc < 2:55863/149‑1 (MQ=255) gtACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTagc > 1:55863/1‑149 (MQ=255) tACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTagcga > 2:1017806/1‑150 (MQ=255) aCTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTagcgag < 1:1017806/150‑1 (MQ=255) tgattgatCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTagcgagcg > 1:1510129/1‑150 (MQ=255) attgatCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGaa > 2:711561/1‑134 (MQ=255) attgatCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGaa < 1:711561/134‑1 (MQ=255) attgatCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGca > 1:1613158/1‑150 (MQ=255) attgatCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGca < 2:389837/150‑1 (MQ=255) ttgatCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGcac > 2:558449/1‑150 (MQ=255) atCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGAACTACGCTGAACACACTAGCGAGCGcacaca > 2:1416433/1‑150 (MQ=255) tCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACaa < 2:1649333/150‑1 (MQ=255) gCTGCACACTCCTTGGACGACCCCCGACA‑TCCCCCTCACTCCATAGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATAc < 2:1667104/150‑1 (MQ=255) cTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACg < 1:1156626/150‑1 (MQ=255) tGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACgg < 1:1285163/150‑1 (MQ=255) aTCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGc < 2:300092/150‑1 (MQ=255) ttGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATaa > 1:871796/1‑150 (MQ=255) ttGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATaa > 1:45052/1‑150 (MQ=255) gaaCCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATAAGCTTcc > 1:1899018/1‑150 (MQ=255) aaCCCTGCCG‑GCCGCAGCAcggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacccgaaagcgcctggtagctactcagtcaaaaggtgggccattattaatcatctctcccagcaattt < 2:1690321‑M2/150‑132 (MQ=255) aCCCTGCCG‑GCCGCAGCAcggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacccgaaagcgcctggtagctactcagtcaaaaggtgggccattattaa < 2:1449496‑M2/130‑113 (MQ=255) aCCCTGCCG‑GCCGCAGCAcggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacccgaaagcgcctggtagctactcagtcaaaaggtgggccattattaa > 1:1449496‑M2/1‑18 (MQ=255) ccTGCCG‑GCCGCAGCAcggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacccgaaagcgcct < 1:642188‑M2/93‑78 (MQ=255) ccTGCCG‑GCCGCAGCAcggcagggttcttccaaggattgtgcagcgtcgcgcttactgatcaatcagtacaccttgagaacccgaaagcgcct > 2:642188‑M2/1‑16 (MQ=255) cTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATAAGCTTCCAGCTc > 1:561106/1‑150 (MQ=255) tGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGCGCGCACACAAGCCTCGCCAGATACGGCAAAGCATAAGCTTCCAGCTCa < 1:558449/150‑1 (MQ=255) | GTCGGGCACGTTCGCAAATTGCTGGGAGAGATGATTAATAATGGCCCACCTTTTGACTGAGTAGCTACCAGGCGCTTTCGGGTTCTCAAGGTGTACTGATTGATCAGTAAGCGCGACGCTGCACAATCCTTGGAAGAACCCTGCCG‑GCCGCAGCACGGCAGGGTCGATGCAACTATGGGTCGAGGCGATCAAGCATATCCAGCACGCCGCTAAACAAGCGACCTACGCTGAACACACTAGCGAGCGCACACAAGCCTCGCCAGATACGGCAAAGCATAAGCTTCCAGCTCA > NC_002947/6158275‑6158565 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |