| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 565,068 | G→A | 5.6% | G182D (GGC→GAC) | katA → | catalase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 565,068 | 0 | G | A | 5.6% | 245.2 / 2.1 | 82 | G182D (GGC→GAC) | katA | catalase |
| Reads supporting (aligned to +/- strand): ref base G (37/40); new base A (3/2); total (40/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTCGCGACCCACTTAAGTTCCCGGACTTTATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGAACCTCACCCCGGCAGACGCTGCACGCCTG > NC_002947/564921‑565216 | ttCGCGACCCACTTAAGTTCCCGGACTTTATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCa < 1:893937/150‑1 (MQ=255) cgACCCACTTAAGTTCCCGGACTTTATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTcc < 1:1873582/150‑1 (MQ=255) cgACCCACTTAAGTTCCCGGACTTTATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTcc < 1:341433/150‑1 (MQ=255) ccACTTAAGTTCCCGGACTTTATCCACACCCAGAAGCGCCGCCCGCAGTCCCACCGGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGAc < 1:623806/150‑1 (MQ=255) aCTTAAGTTCCCGGACTTTATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACgg > 1:302569/1‑150 (MQ=255) ttCCCGGACTTTATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGt > 2:98351/1‑150 (MQ=255) ccGGACTTTATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTcac > 2:1100074/1‑150 (MQ=255) ccGGACTTTATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTcac > 1:939030/1‑150 (MQ=255) cGGACTTTATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGACATTc < 1:444230/132‑1 (MQ=255) cGGACTTTATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGACATTc > 2:444230/1‑132 (MQ=255) cTTTCTCCCCACCCAGAAGCGCCCCCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTCCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCAcatgca < 1:574215/150‑1 (MQ=255) tttATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCAcatgcat > 1:831867/1‑150 (MQ=255) cacaCCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCttt < 1:1263689/150‑1 (MQ=255) cacaCCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCttt < 1:1334693/150‑1 (MQ=255) acacCCAGAAGCGCCACCCGCAGTCCAACCTGTAGACTGCTCTCTTCCTGTGTGTCTTCTCGTCTCACGCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTg < 2:1876549/150‑1 (MQ=255) acacCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTg > 1:1876549/1‑150 (MQ=255) cacCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTgg < 2:1896718/150‑1 (MQ=255) cAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGc < 1:733565/150‑1 (MQ=255) cAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGACATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGc > 1:1118367/1‑150 (MQ=255) gAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCca > 2:444030/1‑150 (MQ=255) gcgcCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCacac < 1:1019102/150‑1 (MQ=255) ccGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGc > 2:806576/1‑150 (MQ=255) aGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGa < 1:569413/150‑1 (MQ=255) cAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCaa > 2:1578601/1‑150 (MQ=255) tGAAGAGTGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCaa > 2:1735295/1‑150 (MQ=255) gaagaaTGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCaaa < 1:806576/150‑1 (MQ=255) aagaaTGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAg < 1:468420/150‑1 (MQ=255) aaTGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGt < 2:1513047/150‑1 (MQ=255) gCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAg < 1:98351/150‑1 (MQ=255) tCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAgcg > 1:1056424/1‑150 (MQ=255) aGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGt > 1:1536180/1‑92 (MQ=255) aGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGt < 2:1536180/92‑1 (MQ=255) gatgatGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCAcatgcat < 2:868260/100‑1 (MQ=255) gatgatGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCAcatgcat > 1:868260/1‑100 (MQ=255) gatgatGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATTGCTTTGGCAGCCACACCTCCAGCCTGATCAATGCAACGGGTGAgcgccc > 2:838188/1‑148 (MQ=255) atgatgTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACt < 1:1896596/150‑1 (MQ=255) tgatgTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGCTAACCATCTTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACtt < 1:1100074/150‑1 (MQ=255) gatgTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTg < 2:831867/150‑1 (MQ=255) atgTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTgg < 2:1817870/150‑1 (MQ=255) tgtgGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTggg < 2:22320/150‑1 (MQ=255) tgtgGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTggg > 2:331499/1‑150 (MQ=255) tgGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGAt < 1:867427/122‑1 (MQ=255) tgGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGAt > 2:867427/1‑122 (MQ=255) gggACTTCTGGTCGCACTCTCCAGAGGCGCTGCATCTGGTCACCATCCTGGTGTCCGAGCGTGGCATTCGGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCa > 1:1106424/1‑150 (MQ=255) aCTTCTGGTCGCACTCTCGAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGt > 2:1142875/1‑150 (MQ=255) ttCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTg < 1:88058/94‑1 (MQ=255) ttCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTg > 2:88058/1‑94 (MQ=255) gTCGCACTCTCCAGAAGCGCTGCACCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACCACTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGTCACtt > 2:950495/1‑150 (MQ=255) gCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCa < 2:1361535/89‑1 (MQ=255) gCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCa > 1:1361535/1‑89 (MQ=255) cACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAg < 2:1056424/150‑1 (MQ=255) tcCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCa > 2:257523/1‑150 (MQ=255) tcCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCa > 2:1633549/1‑150 (MQ=255) cAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACa < 1:1519972/93‑1 (MQ=255) cAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACa > 2:1519972/1‑93 (MQ=255) gAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGt < 1:431217/125‑1 (MQ=255) gAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGt > 2:431217/1‑125 (MQ=255) gcgcTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCTTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAgg < 1:1220325/106‑1 (MQ=255) gcgcTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCTTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAgg > 2:1220325/1‑106 (MQ=255) gcTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCAt > 1:1461887/1‑150 (MQ=255) gcTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATCCCGGACGGCTACTGTACCATGAATGGCTGTGGGAGCCACTGCTACAGCCTTATCAATGCAAAGGGTTATCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCAt < 2:1189713/150‑1 (MQ=255) gcTGCATCAGGTCACCATCCTGTTTTCCGATCGTGACATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTc < 1:27728/133‑1 (MQ=255) gcTGCATCAGGTCACCATCCTGTTTTCCGATCGTGACATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTc > 2:27728/1‑133 (MQ=255) cTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGc < 1:453698/87‑1 (MQ=255) cTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGc > 2:453698/1‑87 (MQ=255) cATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAg < 1:1633549/150‑1 (MQ=255) aTCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGa > 2:1408733/1‑150 (MQ=255) tCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGaa < 2:535270/150‑1 (MQ=255) gTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGAACCTc > 2:1721311/1‑150 (MQ=255) gTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTGCAAGTCCCAGCAAGGCATCAAGAACCTc > 2:1772363/1‑150 (MQ=255) tCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGAACCTCa < 1:257523/150‑1 (MQ=255) cACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGAACCTCAc < 2:302569/150‑1 (MQ=255) cATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGa > 2:169971/1‑122 (MQ=255) cATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGa < 1:169971/122‑1 (MQ=255) cATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGaa > 1:348320/1‑141 (MQ=255) cATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGaa < 2:348320/141‑1 (MQ=255) cATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGAACCTCAcccc > 2:414040/1‑150 (MQ=255) cTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATg < 2:860907/79‑1 (MQ=255) cTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATg > 1:860907/1‑79 (MQ=255) tCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGAACCTCACCCCGGCAGACGCt < 1:1578601/150‑1 (MQ=255) cGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGAACCTCACCCCGGCAGACGCTGc > 2:885572/1‑150 (MQ=255) tGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGAACCTCACCCCGGCAGACGCTGCACGCCt > 1:506623/1‑150 (MQ=255) ggCATTCCGGACGGCTCCCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGAACCTCACCCCGGCAGACGCTGCACGCCTg < 1:885572/150‑1 (MQ=255) | TTCGCGACCCACTTAAGTTCCCGGACTTTATCCACACCCAGAAGCGCCACCCGCAGTCCAACCTGAAGAATGCTCAGATGATGTGGGACTTCTGGTCGCACTCTCCAGAAGCGCTGCATCAGGTCACCATCCTGTTTTCCGATCGTGGCATTCCGGACGGCTACCGTCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAATGCAAAGGGTGAGCGCACTTGGGTCAAGTGGCACTTCAAGACCCAGCAAGGCATCAAGAACCTCACCCCGGCAGACGCTGCACGCCTG > NC_002947/564921‑565216 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |