| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 681,300 | T→C | 7.7% | intergenic (+37/+32) | PP_0583 → / ← PP_0584 | AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 681,300 | 0 | T | C | 7.7% | 216.1 / 5.4 | 78 | intergenic (+37/+32) | PP_0583/PP_0584 | AraC family transcriptional regulator/methyl‑accepting chemotaxis transducer |
| Reads supporting (aligned to +/- strand): ref base T (41/31); new base C (4/2); total (45/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.72e-01 | |||||||||||
GGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCCGTG > NC_002947/681155‑681445 | ggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGCTTTTCGGTTTCCTGTGCCGGCCCTTTCGCCGGGGTA‑T‑Ccgc > 2:1323570/1‑150 (MQ=255)ggAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑Ccgc > 2:238624/1‑150 (MQ=255) agaATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGa < 2:290995/150‑1 (MQ=255) tgtgACCGAGGTGGCGGTGGGGTGTGGGTATGTATCCAGCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGAGTGACACCGGGGGAATTGACGCTCTGATTTTCGGTTTCCTGTGCTGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAgg < 2:225202/150‑1 (MQ=255) tgtgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGACAgg > 2:165524/1‑150 (MQ=255) tgtgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAgg < 2:1720500/150‑1 (MQ=255) tgACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGc < 1:1663267/150‑1 (MQ=255) ccGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCgg < 1:131945/150‑1 (MQ=255) aGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGcac > 1:515426/1‑150 (MQ=255) gcggcgCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTTCCGTCCCTTTCGCGGGTTTT‑T‑CCGCGAACGGGACGGCACAg > 2:804259/1‑150 (MQ=255) tGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGTTTTTTGAAGCACAGGCACACGGTCGCCTGTGCCGGCCTTTTCACGGGGCTA‑T‑CCGCGAAAGGGCACGCGCAGGCCATGc > 1:628547/1‑150 (MQ=255) tGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGc < 1:326220/150‑1 (MQ=255) ggggTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGca < 1:238624/150‑1 (MQ=255) gtgGCTATGCCTCCACCTCGGCCTACATTGCGGCATTCAAGAAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCatcatc < 1:146487/150‑1 (MQ=255) tgGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGACAGGGCAGCCACAGGCAATGcataataa > 2:109202/1‑148 (MQ=255) gTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGt > 2:177389/1‑150 (MQ=255) cTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTAACCTTGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGaa > 1:1877828/1‑150 (MQ=255) cACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGaaa > 1:169169/1‑112 (MQ=255) cACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGaaa < 2:169169/112‑1 (MQ=255) ccTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCCTCAGGTGCGGAACCTgc > 1:423038/1‑150 (MQ=255) ccTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCa > 2:830462/1‑150 (MQ=255) ccTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCa < 1:804259/150‑1 (MQ=255) cTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAg > 2:104383/1‑150 (MQ=255) ggCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGATAAC‑C‑CCGCGAAAGGGCCGGcaca < 2:1109772/105‑1 (MQ=21) ggCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGC‑GGATAA‑CCCCGCGAAAGGGCCGGcaca > 1:1109772/1‑105 (MQ=21) aTTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCgg < 2:639283/124‑1 (MQ=255) aTTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCgg > 1:639283/1‑124 (MQ=255) ttCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAATCTGCGCACCAGCGTATCCAGCTCa < 1:1323570/150‑1 (MQ=255) agcagcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATg > 2:8708/1‑104 (MQ=255) agcagcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATg < 1:8708/104‑1 (MQ=255) agcagcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTgg > 1:595268/1‑150 (MQ=255) gcagcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGACAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTGATTGGa > 1:27707/1‑150 (MQ=255) cagcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGAc < 2:922462/150‑1 (MQ=255) agcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACa > 2:5252/1‑150 (MQ=255) gcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAg > 2:1540821/1‑150 (MQ=255) gcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGC‑GGATAACC‑CCGCGAAAGGGCCGGCACAggaaa < 1:1107773/98‑4 (MQ=17) gcTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGC‑GGATAA‑CCCCGCGAAAGGGCCGGCACAggaaa > 2:1107773/1‑95 (MQ=18) gACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGct < 2:34845/150‑1 (MQ=255) acacCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGctc < 1:177389/150‑1 (MQ=255) acacCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGctc > 2:1053263/1‑150 (MQ=255) acCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGGTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCtctc > 1:554685/1‑150 (MQ=255) cGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCatcatc > 1:576156/1‑90 (MQ=255) cGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCatcatc < 2:576156/90‑1 (MQ=255) ggAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTc > 1:324031/1‑150 (MQ=255) ggAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTc < 1:1387961/150‑1 (MQ=255) gAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCCCGGGGTTA‑T‑CCGCGAAAGGGCCTGAACAAGCCATTCATCATCAGGTGCGGAATCTTCGAACCAGCGTAGCCAGCTCATTGGACAGCCCGGCCAGACTTTCGTAGTcc > 1:1281135/1‑150 (MQ=255) ttGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATc < 2:431843/110‑1 (MQ=255) ttGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATc > 1:431843/1‑110 (MQ=255) ttGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAg < 1:387080/125‑1 (MQ=255) ttGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAg > 2:387080/1‑125 (MQ=255) ttGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTgg > 1:439080/1‑150 (MQ=255) ttGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTgg > 2:730233/1‑150 (MQ=255) gcttttCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCt < 1:104383/148‑1 (MQ=255) atggccTGTGCCGGCCCTTTCGCGGATAAC‑C‑CCGCGAAAGGGCCGGCACAGGCCATGCATAATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGc > 1:793521/5‑150 (MQ=37) tttCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGGGCCGCCTGGGCCAGCt > 1:168178/1‑150 (MQ=255) gccTGTGCCGGCCCTTTCGC‑GGATAACC‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGAAAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCg > 2:322403/2‑150 (MQ=37) gtgCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGcca > 1:222154/1‑150 (MQ=255) ggCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAgg < 2:652310/105‑1 (MQ=255) ggCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAgg > 1:652310/1‑105 (MQ=255) ggCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAAc < 1:1053263/150‑1 (MQ=255) gCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGc < 1:1196521/142‑1 (MQ=255) gCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGc > 2:1196521/1‑142 (MQ=255) gCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACt < 1:109202/150‑1 (MQ=255) gCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACt > 2:549517/1‑150 (MQ=255) ccTTTCGCGGGGTTC‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCGGGCCATGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgc < 1:830462/150‑1 (MQ=255) ccTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGa < 1:1320470/110‑1 (MQ=255) ccTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGa > 2:1320470/1‑110 (MQ=255) ccTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgc > 1:562067/1‑150 (MQ=255) cTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCg < 2:1023158/107‑1 (MQ=255) cTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCg > 1:1023158/1‑107 (MQ=255) tttCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcgc > 1:1334577/1‑150 (MQ=255) tttCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTgcgc > 1:969119/1‑150 (MQ=255) gcgGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATcc > 2:524322/1‑150 (MQ=255) gggTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAgg > 1:1278809/1‑93 (MQ=255) gggTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAgg < 2:1278809/93‑1 (MQ=255) ggTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCCGt < 2:439080/150‑1 (MQ=255) gTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCCGTg > 1:1444196/1‑150 (MQ=255) gTTA‑T‑AGGCGAAAGGGCCGTCGCAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGAACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCCGTg < 2:628547/150‑1 (MQ=255) | GGAGAATGTGACCGAGGCGGCGCTGGGGTGTGGGTATGACTCCACCTCGGCCTACATTGCGGCATTCAAGCAGCTATTTGGCGCGACACCGGGGGAATTGAAGCTCTGATTTTCGGTTTCCTGTGCCGGCCCTTTCGCGGGGTTA‑T‑CCGCGAAAGGGCCGGCACAGGCCATGCATCATCAGGTGCGGAACCTGCGCACCAGCGTATCCAGCTCATTGGACAGCCCGGCCAGGCTCTCGGAGTCCTGGCGCGCCGCCTGGGCCAGCTCGGCCACCAACTGCGCATCCCCGTG > NC_002947/681155‑681445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |