| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 733,648 | A→T | 10.9% | intergenic (+19/‑28) | PP_t09 → / → PP_t10 | tRNA‑Lys/tRNA‑Pro |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 733,648 | 0 | A | T | 10.9% | 210.4 / 16.4 | 74 | intergenic (+19/‑28) | PP_t09/PP_t10 | tRNA‑Lys/tRNA‑Pro |
| Reads supporting (aligned to +/- strand): ref base A (33/32); new base T (4/4); total (38/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.19e-01 | |||||||||||
TTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACC > NC_002947/733503‑733797 | tttGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTCCGGGTCGTTAGTTAAGTTGGTAGAGCAGTGGCTTTTTAACCAATTGGTGTTAGGTTCGAATCTGACACGACCCACCAAGTAGAAAAGGGCTTCTCacggg > 2:656142/1‑146 (MQ=14)tttGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAaga < 2:696347/150‑1 (MQ=255) tGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAgaga < 1:1114646/150‑1 (MQ=255) gAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTCCGTGTCGTTAGCTCAGTTGTGAGAGCAGTTGGCTGTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCTACCATGTAGAAAAGGGCATCTCAAGGAGGTGc > 1:649428/1‑150 (MQ=17) ggATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCttt > 2:1432289/1‑150 (MQ=255) ggATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCttt > 2:1226568/1‑150 (MQ=255) tCAGGAGTTCGAATCCCCTCACCCCGACCATTTTCCGTGTCGTTCGTTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCttttgttt < 1:1666220/150‑1 (MQ=255) ttCGAATCCCCTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAacac > 1:282750/1‑150 (MQ=255) gAATCCCCTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCg > 1:348719/1‑150 (MQ=255) aaTCCCCTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAaga < 2:555105/124‑1 (MQ=255) aaTCCCCTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAaga > 1:555105/1‑124 (MQ=255) aaTCCCCTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCgg < 2:1211353/150‑1 (MQ=255) cTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTa < 2:1527444/150‑1 (MQ=255) cTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGCAGCATCGATGAACTTCAACCAATTGGTCGTAGGAGCGAATCATAAAAGACCCACCTTGTAGAGAAGGGCATCTCAAAGAGGTGCCCTTTTTTTTGAAACACTCGGGGTGTa > 1:1493153/1‑150 (MQ=21) cACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAgc < 2:348719/150‑1 (MQ=255) cccGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAGGGGCACCTGCATGAGATGCCCTTTTTTTTTAACCTCTAAGGGTGTacccat > 2:697685/1‑145 (MQ=14) cccGACCATTTTCCGGGTCGTTAGCGCAGTGGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGACGCCCTTTTTTTTGAACCCCTCGGGGTGTaccccc > 2:890762/1‑145 (MQ=21) gggTCGTTAGCTCAGTTGGTAGAGCAGTTGGATTTTAACCAATTGGTCGTAGGGTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTATTTGAAACACTTGGGGGGTAGCGCAGTCAGGTAgcgcgc > 1:697013/1‑150 (MQ=21) ggTCGTTAGCTCAGTTTGTAGAGCAGTTGGGTTTTAACGTAGTGGTAGTAGGTTCGAATACTACACGACCCACCATGTAGAGAAGGGCATTTTAAAGAGATGCCCTTTTTTTGGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGcc < 2:649428/150‑1 (MQ=255) gTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCt < 1:546746/150‑1 (MQ=255) ttAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCtt < 1:1564380/150‑1 (MQ=255) ttAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCtt > 1:146233/1‑150 (MQ=255) cTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCtttt > 1:594280/1‑100 (MQ=255) cTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCtttt < 2:594280/100‑1 (MQ=255) tccattGGTAGAGCGGTTGGCTTTTAACCATTTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGa < 1:1257446/146‑1 (MQ=255) tCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTc < 2:144938/128‑1 (MQ=255) tCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTc > 1:144938/1‑128 (MQ=255) tCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGa < 1:1432289/150‑1 (MQ=255) gTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCa < 1:175202/150‑1 (MQ=255) gTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGAt < 1:1226568/150‑1 (MQ=255) tAGAGCAGTTGGCTTTTAACGAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCTTTGAGATGcc > 1:365467/1‑86 (MQ=17) tAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCTTTGAGATGcc < 2:365467/86‑1 (MQ=14) tAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTTAAACACTCGGGGTGCAGCGCAGTCGGGTAGAGCGCCTGTTTTGGGAGCAGGCTg > 2:1613600/1‑150 (MQ=25) agCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCa < 2:1493153/150‑1 (MQ=255) gCAGTTGGCTTCTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAg < 2:697013/150‑1 (MQ=255) aGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGa > 2:44457/1‑150 (MQ=255) gTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAg > 2:326245/1‑150 (MQ=255) ttGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCTTTGAGATGCCCtttt < 2:667967/83‑1 (MQ=17) ttGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCTTTGAGATGCCCtttt > 1:667967/1‑83 (MQ=17) tGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGtt < 1:890762/150‑1 (MQ=255) ttttAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGaa < 1:326245/150‑1 (MQ=255) ttttAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGaa > 1:1342627/1‑150 (MQ=255) ttttAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGaa > 1:900340/1‑150 (MQ=255) ttttAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGCATGTCAGGAGTTCGaa > 2:1651488/1‑150 (MQ=255) ccAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAg < 2:982165/124‑1 (MQ=255) ccAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAg > 1:982165/1‑124 (MQ=255) gTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCg > 1:1483717/1‑150 (MQ=255) gTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCTTTGAGATGCCCtttt > 1:1201450/1‑62 (MQ=18) gTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCTTTGAGATGCCCtttt < 2:1201450/62‑1 (MQ=18) ttCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAg < 2:730816/120‑1 (MQ=255) ttCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAg > 1:730816/1‑120 (MQ=255) ttCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCAtttt > 2:371731/1‑150 (MQ=255) cGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAATGAGTTGTTCTTTTTTTTGCAACCCCCGGGATGTACCCCAGTACGGTCGCGCTCCCCCTTCAGGAGCATGTTGTGATGAGTTCGAATCCCCTCACCCCGACCATTTTTg < 2:282750/150‑1 (MQ=19) aTCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGAAGGGTGTCAGGAGTGCGAATTCCCGCACCCCGACCAATTTTGGGt > 2:452794/1‑150 (MQ=25) tCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAac > 1:834613/1‑60 (MQ=255) tCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAac < 2:834613/60‑1 (MQ=255) tCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTc > 2:826075/1‑150 (MQ=255) cTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGAcc > 2:678836/1‑137 (MQ=255) cTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGAcc < 1:678836/137‑1 (MQ=255) cTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGt < 1:44457/150‑1 (MQ=255) tACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAACGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGCATAAGAATCCCCTTACGCCCACCAAGTTTgtggtggt > 2:1384383/1‑143 (MQ=25) tACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGCAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGtt > 2:191182/1‑150 (MQ=255) ccaccaTGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTc < 2:390523/139‑1 (MQ=255) ccaccaTGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTc > 1:390523/1‑139 (MQ=255) caccaTGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTg < 1:1562111/134‑1 (MQ=255) caccaTGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTg > 2:1562111/1‑134 (MQ=255) accaTGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTg > 1:958476/1‑150 (MQ=255) accaTGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTg < 1:826075/150‑1 (MQ=255) caTGTAGAAAACGGCATCTCAAAGAAGTGCCCTTTTTTGTAAAACACTCGTGTTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGt < 1:240733/150‑1 (MQ=18) gTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTaga < 2:1483717/150‑1 (MQ=255) aaGGGCATCTCTTTGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAgcgcgc < 2:1326733/67‑1 (MQ=25) aaGGGCATCTCTTTGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAgcgcgc > 1:1326733/1‑67 (MQ=25) aaGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAACGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGtt < 1:1384383/150‑1 (MQ=255) gggCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCCTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTgg > 1:378444/1‑150 (MQ=255) cATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCtt > 1:343515/1‑150 (MQ=255) aaaGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAAcc > 2:1784512/1‑150 (MQ=255) | TTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAATCCTACACGACCCACCATGTAGAAAAGGGCATCTCAAAGAGATGCCCTTTTTTTTGAAACACTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCAGGAGTTCGAATCCCCTCACCCCGACCATTTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACC > NC_002947/733503‑733797 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |