| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 966,598 | A→T | 5.4% | L41* (TTG→TAG) ‡ | PP_0828 ← | membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 966,598 | 0 | A | T | 5.4% | 288.1 / 7.2 | 93 | L41* (TTG→TAG) ‡ | PP_0828 | membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (44/43); new base T (3/2); total (48/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.97e-01 | |||||||||||
AGCTGCGCGAACTGTTCACCAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTACCTCGAAACGCGGGGGATG > NC_002947/966449‑966747 | aGCTGCGCGAACTGTTCACCAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCa < 1:719043/150‑1 (MQ=255) aaCTGTTCACCAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAACATGTTCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCa > 1:18409/1‑150 (MQ=255) aCTGTTCACCAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCAt > 2:1403942/1‑150 (MQ=255) ttCACCAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCTTGAACAGCaag < 2:1857402/147‑3 (MQ=255) ttCACCAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCTTGAACAGCaag > 1:1857402/1‑145 (MQ=255) ttCACCAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGaaa > 2:1927052/1‑150 (MQ=255) tCACCAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAAt < 2:1426828/150‑1 (MQ=255) tCACCAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAAt < 1:31978/150‑1 (MQ=255) aCCAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCg > 1:1441672/1‑150 (MQ=255) ccAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCCTGAAATCGa > 1:404715/1‑150 (MQ=255) ccAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGa < 1:494531/150‑1 (MQ=255) ccAGCGCGCCCCACAGGGTGCGAGCCTCCAACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGa < 2:347175/150‑1 (MQ=255) cAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGAt > 2:996606/1‑150 (MQ=255) aGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATg < 1:1468687/150‑1 (MQ=255) gcgcgcCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGa < 1:1566373/147‑1 (MQ=255) gcgcgcCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGa > 2:1566373/1‑147 (MQ=255) gcgcCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTg < 1:874443/150‑1 (MQ=255) cccACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATAGATGGTGACCa > 1:1174298/1‑150 (MQ=255) ccACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCTTGAACAGCaa > 1:1528685/1‑131 (MQ=255) ccACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCTTGAACAGCaa < 2:1528685/132‑2 (MQ=255) ccACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAg > 1:1057336/1‑150 (MQ=255) acaGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGc < 2:1816341/128‑1 (MQ=255) acaGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGc > 1:1816341/1‑128 (MQ=255) cGAGCCTCCCACCAGCGGCTGTACACGCTGATCCTACGAAAATCCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAg < 2:18409/150‑1 (MQ=255) ccTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATc < 2:232189/124‑1 (MQ=255) ccTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATc > 1:232189/1‑124 (MQ=255) tCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACCCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATcagc < 1:1788769/150‑1 (MQ=255) ccaccaGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATca < 2:383705/146‑1 (MQ=255) ccaccaGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATca > 1:383705/1‑146 (MQ=255) caccaGCGGCTGTAGGCGCTGCTGTTGTGAAAACTCACCAGCACCACCAGCGCTGAGCTCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCagcagc > 1:1323056/1‑150 (MQ=255) gCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGaa > 1:200787/1‑150 (MQ=255) cTGTAGGCGCTGCTGTTGCGAACACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGGCAGCGGGATCAGTGGCAGGGTGAACTTGCTGCTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGc < 1:218991/150‑1 (MQ=255) tgtacccgcTTCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGAAGGGAGAACTTGCTGTTCCAGAACAGCATAAAATCGACGGTGACCAGCACATCCAAGATAAGCAGCCAGAACAACg > 2:862986/7‑150 (MQ=255) tAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGAc > 1:1644378/1‑150 (MQ=255) tAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGAc < 2:1708046/150‑1 (MQ=255) ctgctgTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCg < 2:924069/150‑1 (MQ=255) ttGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCa < 1:1835021/106‑1 (MQ=255) ttGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCa > 2:1835021/1‑106 (MQ=255) ttGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCGGCCAGAACAGCGACCAGCCGATATAg < 2:404715/150‑1 (MQ=255) ttGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAg > 2:1587225/1‑150 (MQ=255) tGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGc < 2:1644378/150‑1 (MQ=255) tGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGc < 2:683652/150‑1 (MQ=255) cGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCg > 1:1196120/1‑150 (MQ=255) cGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCg > 2:314239/1‑150 (MQ=255) gAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGa < 2:29890/150‑1 (MQ=255) gAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGa < 2:200787/150‑1 (MQ=255) gAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGa < 2:881548/150‑1 (MQ=255) aaaaCTCACCAGCACCACCAGCGCTGAGCCCGGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGAt < 2:280111/114‑1 (MQ=255) aaaaCTCACCAGCACCACCAGCGCTGAGCCCGGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGAt > 1:280111/1‑114 (MQ=255) cTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTc < 2:1067456/150‑1 (MQ=255) tCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGCGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCt > 2:1206718/1‑150 (MQ=255) aCCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTc > 2:730254/1‑150 (MQ=255) aCCAGAACCACGAGCGATGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTc < 2:1807196/150‑1 (MQ=255) cAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTcac > 1:129029/1‑150 (MQ=255) cAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTcac < 1:1105763/150‑1 (MQ=255) cAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCCATGGTCTTcac > 2:1315891/1‑150 (MQ=255) caccacCAGCGCTGAGCCCATCAAGGTCAGCCGCATCAGTGCCAGGGTTAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCATCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTcaccac < 1:739084/150‑1 (MQ=255) caccaGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGc > 1:1765071/1‑115 (MQ=255) caccaGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGc < 2:1765071/115‑1 (MQ=255) cgcTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAGCTTGGTGTTTAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTa < 2:1323056/150‑1 (MQ=255) gcTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTAc < 1:314239/150‑1 (MQ=255) gCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCg > 1:677907/1‑150 (MQ=255) ccAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACtt > 2:592719/1‑145 (MQ=255) ccAGCAGGGTCAGAGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACtt < 1:592719/145‑1 (MQ=255) cagcagGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGc > 2:855030/1‑150 (MQ=255) gTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGAc < 1:1590295/149‑1 (MQ=255) gTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGAc > 2:1590295/1‑149 (MQ=255) cAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGAt < 2:1307167/144‑1 (MQ=255) cAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTc < 1:730254/150‑1 (MQ=255) cAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTc > 2:239480/1‑150 (MQ=255) cAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAAAAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGAt > 1:1307167/1‑144 (MQ=255) aGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCt < 2:129029/150‑1 (MQ=255) gCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTc > 1:464314/1‑116 (MQ=255) gCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTc < 2:464314/116‑1 (MQ=255) aGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGa < 1:996606/150‑1 (MQ=255) gTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTca > 1:791393/1‑108 (MQ=255) gTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTca < 2:791393/108‑1 (MQ=255) tGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACAt < 2:681939/56‑1 (MQ=255) tGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACAt > 1:681939/1‑56 (MQ=255) cAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTa > 1:1064477/1‑150 (MQ=255) ggTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGc < 2:1058290/110‑1 (MQ=255) ggTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGc > 1:1058290/1‑110 (MQ=255) ggTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTc < 2:1150219/136‑1 (MQ=255) ggTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTc > 1:1150219/1‑136 (MQ=255) ggTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTACCt > 1:405402/1‑150 (MQ=255) gTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTACCTc < 1:1927052/150‑1 (MQ=255) tGAACTTGCTGTTCAAGAAGAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTACCTCg > 1:1425626/1‑150 (MQ=255) tttcatGCTGTTCTTGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTACCTCGa > 2:1751070/6‑150 (MQ=255) cTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTACCTCGAAAc > 2:165470/1‑150 (MQ=255) tGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTACCTCGAAACGCggg > 1:979021/1‑150 (MQ=255) ttCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTACCTCGAAACGCggggg > 2:253271/1‑150 (MQ=255) ttCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTACCTCGAAACGCggggg > 2:593983/1‑150 (MQ=255) ttCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTACCTCGAAACGCggg > 2:1903862/1‑148 (MQ=255) ttCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTACCTCGAAACGCggg < 1:1903862/148‑1 (MQ=255) aaGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTACCTCGAAACGCGGGGGATg < 1:253271/150‑1 (MQ=255) | AGCTGCGCGAACTGTTCACCAGCGCGCCCCACAGGGTGCGAGCCTCCCACCAGCGGCTGTAGGCGCTGCTGTTGCGAAAACTCACCAGCACCACCAGCGCTGAGCCCAGCAGGGTCAGCGGGATCAGTGGCAGGGTGAACTTGCTGTTCAAGAACAGCATGAAATCGATGGTGACCAGCACATCCCAGATCAGCAGCCAGAACAGCGACCAGCCGATATAGCCGATGGTCTTCACCACCAGGCGGTACTTGCGGGCGATGACGTCTTTCACGCGAGGGTACCTCGAAACGCGGGGGATG > NC_002947/966449‑966747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |