| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 981,580 | G→A | 6.8% | A152T (GCG→ACG) | hscA → | DnaK‑like molecular chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 981,580 | 0 | G | A | 6.8% | 257.8 / 5.3 | 87 | A152T (GCG→ACG) | hscA | DnaK‑like molecular chaperone |
| Reads supporting (aligned to +/- strand): ref base G (43/38); new base A (3/3); total (46/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
CATACCGCTTTGTGGGTGGTGAATCGCACATGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGC > NC_002947/981437‑981729 | cATACCGCTTTGTGGGTTGTGAATCGCACATGCCGTTCATCCACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGa < 1:1384396/150‑1 (MQ=255) ccGCTTTGTGGGTGGTGAATCGCACATGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCAc > 2:974054/1‑150 (MQ=255) cGCTTTGTGGGTGGTGAATCGCACATGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCAcc < 1:407184/150‑1 (MQ=255) cGCTTTGTGGGTGGTGAATCGCACATGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCAcc > 1:525043/1‑150 (MQ=255) gCTTTGTGGGTGGTGAATCGCACATGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCg < 1:564013/150‑1 (MQ=255) ggtggtGAATCGCACATGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGtgcctgcc < 2:1625334/150‑1 (MQ=255) gAATCGCACATGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTc > 1:1898527/1‑150 (MQ=255) aaTCGCACATGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGAt < 1:1145744/130‑1 (MQ=255) aaTCGCACATGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGAt > 2:1145744/1‑130 (MQ=255) aTGCCGTTCCTCGACACCGTGCAGGGGCAAAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGGCGAAGCCACCTTGGGTGGCGAGCGGGTAGGCGCGGTGATCACCGTGACTGCCTATTTCGATGACGcc > 2:670078/1‑150 (MQ=255) tGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGAt < 1:1268707/143‑1 (MQ=255) tGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGAt > 2:1268707/1‑143 (MQ=255) gTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGt > 2:285797/1‑114 (MQ=255) gTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGt < 1:285797/114‑1 (MQ=255) gTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACg > 2:1274404/1‑150 (MQ=255) cATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGAAAGTGTCTGCCAACAGACTGAAGGTGTTGCGCAAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGGGCCTGCCTATTTCGATGACGCCCAACGTCa < 2:364231/150‑1 (MQ=255) aTCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAg > 2:344433/1‑150 (MQ=255) aTCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGCAGGCACGGTGATCACCGcgcctac < 2:900361/125‑3 (MQ=255) aTCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGCAGGCACGGTGATCACCGcgcctac > 1:900361/1‑123 (MQ=255) tCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAgg < 2:1898527/150‑1 (MQ=255) tCGACACCGTGCAGGGGCCGAAAAGCCCTATGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAgg < 1:1679590/150‑1 (MQ=255) cGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGc > 2:333468/1‑150 (MQ=255) gACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGCGGCGGTGTTCACCGTGCCGGCGTTTTTGGATGACGCCCAACGTCAGGCt > 2:908309/1‑150 (MQ=255) acacCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTa > 2:151059/1‑150 (MQ=255) cGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTTTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCaa > 2:214412/1‑150 (MQ=255) gCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGa < 1:974054/150‑1 (MQ=255) aGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCGTGGGTGGTGAGCGGGTAGGCGCGGTGATCACCGGGCCTGGCTATTTCTGTGACGCCCAATGTCGGGCTAGCAAAGAcc > 2:409055/1‑149 (MQ=255) ggggCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGc > 1:80568/1‑150 (MQ=255) gggCCGAAAAGCCCTGTGGAAGTGTATGCCGACATCCTGCAGGTGTGGCGCGAACGGGCCGAATCCACCTGGTGTGGCGAGCTGTTAGGCGCGGTGGTCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCa > 2:711193/1‑150 (MQ=255) gggCCGAAAAGCCATGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGGTTGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCa > 2:711335/1‑150 (MQ=255) ggCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAg > 1:1177670/1‑150 (MQ=255) cGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAgcgc > 1:624524/1‑150 (MQ=255) aaaaGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGtgcctg > 1:1114603/1‑103 (MQ=255) aaaaGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGtgcctg < 2:1114603/103‑1 (MQ=255) aaaaGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGt < 2:367784/150‑1 (MQ=255) aaGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCt < 2:1177670/150‑1 (MQ=255) cccTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTggc > 1:1585692/1‑150 (MQ=255) tgtgGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTggccgg > 2:1116463/1‑150 (MQ=255) gtgGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTggccggc < 1:1116463/150‑1 (MQ=255) tgGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTggccggcc < 2:237567/150‑1 (MQ=255) tgGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTggccggcc < 2:525043/150‑1 (MQ=255) gtgtCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAAc < 2:80568/150‑1 (MQ=255) gACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGAc > 2:1463085/1‑93 (MQ=255) gACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGAc < 1:1463085/93‑1 (MQ=255) aCATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAgg > 1:1307886/1‑105 (MQ=255) aCATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAgg < 2:1307886/105‑1 (MQ=255) tCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACg < 2:177584/90‑1 (MQ=255) tCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACg > 1:177584/1‑90 (MQ=255) ccTGAAGGTGTTGCGCGAACGGGCCGAAGTCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCt < 2:1458410/150‑1 (MQ=255) ccTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGcc > 2:722196/1‑149 (MQ=255) cTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTgcgc < 2:1846399/144‑1 (MQ=255) cTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTgcgc > 1:1846399/1‑144 (MQ=255) gAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCaa < 1:214412/150‑1 (MQ=255) aaGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAAc > 2:1639905/1‑150 (MQ=255) aaGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAAc > 2:169104/1‑150 (MQ=255) ttGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCg > 2:895077/1‑150 (MQ=255) tGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGa < 1:309104/150‑1 (MQ=255) tGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGa < 2:1764108/150‑1 (MQ=255) gcgAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTgcgc < 2:1030911/131‑1 (MQ=255) gcgAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTgcgc > 1:1030911/1‑131 (MQ=255) gcgAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTg > 1:1074524/1‑150 (MQ=255) aaCGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCgg < 1:344433/150‑1 (MQ=255) aCGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTggccggc > 2:34268/1‑112 (MQ=255) aCGGGCCGAAGCCACCTTGGGTGGCGAGCTCGTATGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTggccggc < 1:34268/112‑1 (MQ=255) ggCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTggccggc > 1:366797/1‑109 (MQ=255) ggCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTggccggc < 2:366797/109‑1 (MQ=255) ggaGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACTGTGCCTGCCGCTTTCGATGGCGCCCAACGTCAGGCTACCAAAGAGGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTGACCGAAACGACGGCGGCCGCCGTa < 2:545462/148‑1 (MQ=255) aCCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCTTGAGCAGTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTAc > 1:452047/1‑150 (MQ=255) cTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACgg > 1:1636003/1‑150 (MQ=255) cTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTAAGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACgg > 1:1475770/1‑150 (MQ=255) ggTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTg < 2:1137036/150‑1 (MQ=255) ggTGGCGAGCTCGTAGGCGCGCTGATCCTCGTCGCTGCTTATTTGGACGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTg < 2:1475770/150‑1 (MQ=255) tGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGa > 2:293269/1‑150 (MQ=255) ggCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGAc < 2:1636003/150‑1 (MQ=255) gCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGaa < 1:169104/150‑1 (MQ=255) ggTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGtg < 1:1479926/91‑1 (MQ=255) ggTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGtg > 2:1479926/1‑91 (MQ=255) gcaGGCACGGTGATCACCGCGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAAc < 2:1381586/103‑1 (MQ=255) gcaGGCACGGTGATCACCGCGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAAc > 1:1381586/3‑105 (MQ=255) gcaGGCACGGTGATCACCGCGCCTACCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTgcgc < 2:553593/94‑1 (MQ=39) gcaGGCACGGTGATCACCGCGCCTACCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTgcgc > 1:553593/3‑96 (MQ=38) gTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGcc < 2:1074524/150‑1 (MQ=255) gTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGcc > 2:1865265/1‑150 (MQ=255) gTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGcc > 2:1864960/1‑150 (MQ=255) gTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGcc > 2:1683528/1‑150 (MQ=255) gTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGACAACGGATCCTACGGCCTGGACCAGAACGcc > 1:493122/1‑150 (MQ=255) ggCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGaa < 1:409055/150‑1 (MQ=255) gcgcGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAg > 2:1065386/1‑150 (MQ=255) gcgcGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAg > 1:549624/1‑150 (MQ=255) gcgGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGc > 2:1001022/1‑150 (MQ=255) gcgGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTACTGCCTCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGc > 1:19111/1‑150 (MQ=255) | CATACCGCTTTGTGGGTGGTGAATCGCACATGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCTGTGGAAGTGTCTGCCGACATCCTGAAGGTGTTGCGCGAACGGGCCGAAGCCACCTTGGGTGGCGAGCTGGTAGGCGCGGTGATCACCGTGCCTGCCTATTTCGATGACGCCCAACGTCAGGCTACCAAAGACGCAGCGCGTCTGGCCGGCCTGAACGTGCTGCGCCTGCTCAACGAACCGACTGCGGCCGCCGTAGCCTACGGCCTGGACCAGAACGCCGAAGGC > NC_002947/981437‑981729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |