| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,130,198 | A→T | 6.8% | intergenic (‑247/+57) | gcvH‑I ← / ← PP_0990 | glycine cleavage system protein H/DoxX family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,130,198 | 0 | A | T | 6.8% | 253.9 / 7.0 | 86 | intergenic (‑247/+57) | gcvH‑I/PP_0990 | glycine cleavage system protein H/DoxX family protein |
| Reads supporting (aligned to +/- strand): ref base A (45/35); new base T (4/2); total (49/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
TTATTTATCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCCAGGTCAGGTGGGTGGG > NC_002947/1130049‑1130347 | ttatttatCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTacga > 1:1258889/1‑150 (MQ=255)ttatttatCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCATGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTacga > 1:1666254/1‑150 (MQ=255) tccgatctAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTa < 2:443579/143‑1 (MQ=255) ctAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGaaa > 2:1332273/2‑150 (MQ=255) tAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGACGCTGTGTATCGTTTTCGCTACGACGTAGCGaaaa < 1:1610239/150‑1 (MQ=255) aGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAAc < 2:1250095/150‑1 (MQ=255) gATTACGTAAATTTACGGAGAAGCCGTAGTTATGGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACg > 2:1574855/1‑150 (MQ=255) gTACATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACAt < 2:360886/150‑1 (MQ=255) gTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACAt > 1:40282/1‑150 (MQ=255) ttACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATgtggtg > 2:56865/1‑150 (MQ=255) ggAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAGGGTTTTGAGCGTCAACCCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTg < 1:1198816/150‑1 (MQ=255) gCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTg‑g > 2:1016523/1‑150 (MQ=255) gTATTTATTTTGTGGAAGGATATCTTTACAGGTGCCTCTGCGATGAAAAGGGTTTGAGCATGAATCCCTTGTGCACCTACGGCGTGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGTCTGGACTG‑GCGa < 1:18211/150‑1 (MQ=255) gTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGa < 1:1269361/150‑1 (MQ=255) gTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGa > 1:819526/1‑150 (MQ=255) tttattGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGTAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGGGCCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGt < 1:712507/150‑1 (MQ=255) ttGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCa > 2:1410159/1‑150 (MQ=255) tgtgGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATg > 1:1738050/1‑150 (MQ=255) gAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGGTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGAATAGCACACGGTCTGAAATCTAGTGAATACGATACATGTGGTGCCTGGACTG‑GCGAGGGGGAGATGGCCt > 1:1198251/1‑150 (MQ=255) tGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCg > 2:195934/1‑150 (MQ=255) tGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCg < 2:1258889/150‑1 (MQ=255) gTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCAtct > 1:842191/1‑150 (MQ=255) gTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCAtct < 2:842191/150‑1 (MQ=255) ttACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACAt < 1:1155111/106‑1 (MQ=255) ttACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACAt > 2:1155111/1‑106 (MQ=255) ttACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCg < 2:1776309/142‑1 (MQ=255) ttACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCg > 1:1776309/1‑142 (MQ=255) aGGTGCCTCTGAGAGGAAAAGGGATTGAGCATCAAAGCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGGGAAAACGATACATGTGGTGGCTGGACTG‑GCGAGGTGCCAAGGGCCTTCGGCCATCTCGCtt > 2:136918/1‑150 (MQ=255) gTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑Gc > 2:1928386/1‑117 (MQ=255) gTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑Gc < 1:1928386/117‑1 (MQ=255) ctctGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTcagca < 1:514829/150‑1 (MQ=255) ctctGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTcagca > 2:1211015/1‑150 (MQ=255) ctctGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTcagca > 1:1764884/1‑150 (MQ=255) tctGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTcagcag > 1:1038454/1‑150 (MQ=255) agagGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAgatga > 1:1487349/1‑150 (MQ=255) ggAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGa > 2:1242231/1‑107 (MQ=255) ggAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGa < 1:1242231/107‑1 (MQ=255) gAAAAGGGCTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGAGTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCa > 1:910027/1‑150 (MQ=255) aaaaGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAg > 2:1523948/1‑150 (MQ=255) aaaGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACAt > 1:859037/1‑85 (MQ=255) aaaGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACAt < 2:859037/85‑1 (MQ=255) aaaGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGc > 2:246867/1‑150 (MQ=255) aaGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCg > 2:1472971/1‑150 (MQ=255) tttGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGTCGTAGCGAAAACGa < 2:471834/74‑1 (MQ=255) tttGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGTCGTAGCGAAAACGa > 1:471834/1‑74 (MQ=255) tttGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAAc < 2:1764884/150‑1 (MQ=255) gAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAAcgcg < 1:56865/150‑1 (MQ=255) aGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACgcgc < 1:1332273/150‑1 (MQ=255) cATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCg > 2:864571/1‑150 (MQ=255) tCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCTTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGgc > 2:356002/1‑150 (MQ=255) aaCCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGcc > 1:1289093/1‑150 (MQ=255) cccTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTc > 1:1383987/1‑150 (MQ=255) ccTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTc > 2:1367985/1‑100 (MQ=255) ccTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTc < 1:1367985/100‑1 (MQ=255) cTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCgg > 1:1503501/1‑150 (MQ=255) tgtgCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGc < 1:195934/150‑1 (MQ=255) gtgCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCa < 2:40282/150‑1 (MQ=255) gCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAAc < 2:1038454/150‑1 (MQ=255) ccgccgGCGAGTAGGCTTTGTATCGTTGTCGCTACGACGTAGCGAAAACGATACATGTGGTG‑CAATACGGTTCTAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAg < 1:1574855/150‑1 (MQ=255) ccGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAg < 2:1289093/150‑1 (MQ=255) cGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAgg > 2:694236/1‑150 (MQ=255) aCGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGag > 2:595016/1‑150 (MQ=255) gaggagGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAgcagca > 2:478270/1‑150 (MQ=255) gaggagGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCAAATGCTCTTTGGTCATCTTGCTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAgcagca > 1:1204208/1‑150 (MQ=255) gaggagGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGGGCCAATGACCTTCGGTCATCTCCCTTTCAGCAGCTGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAgcagca > 2:851636/1‑150 (MQ=255) aggaggCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGagcagctt < 1:1523948/150‑3 (MQ=255) aggCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAagag < 2:819526/150‑1 (MQ=255) accacatgtATCGTTTTCGCTACGTCGTAGCGAAAACGCTACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCCCCTCGGGCAACCATGAGCAGCAacag > 2:447819/7‑150 (MQ=38) ccacatgtATCGTTTTCGCTACGTCGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCgg > 2:724035/6‑129 (MQ=255) ccacatgtATCGTTTTCGCTACGTCGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCgg < 1:724035/124‑1 (MQ=255) gCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGcc > 2:1844665/1‑150 (MQ=255) tgtATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGa < 1:1150331/134‑1 (MQ=255) tgtATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGa > 2:1150331/1‑134 (MQ=255) tgtATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGc > 2:1664601/1‑150 (MQ=255) tATCGTTTTCGCTACGACGTAGCGAAAACAATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGagca < 2:993990/135‑1 (MQ=255) tATCGTTTTCGCTACGACGTAGCGAAAACAATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGagca > 1:993990/1‑135 (MQ=255) ttCGTTTTCGCTAAGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCca < 1:1127423/149‑1 (MQ=255) tCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcag < 1:864571/150‑1 (MQ=255) gTTTTCGCTACGTCGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcaggt > 2:1796530/1‑150 (MQ=255) gTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcaggt < 1:1410159/150‑1 (MQ=255) gTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcaggt > 1:1312185/1‑150 (MQ=255) gTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcaggt > 1:1265113/1‑150 (MQ=255) ttttCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAAc < 2:440975/122‑1 (MQ=255) ttttCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAAc > 1:440975/1‑122 (MQ=255) ttttCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAg < 2:1622220/125‑1 (MQ=255) ttttCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAg > 1:1622220/1‑125 (MQ=255) cGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCcaggtcaggt < 1:595016/150‑1 (MQ=255) tACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCCAGGTCAggtggg > 2:1427301/1‑150 (MQ=255) gacgTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCCAGGTCAGgtgggtgg < 2:1738050/150‑1 (MQ=255) gacgTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAACTGATTATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCCAGGTCAGgtgggtgg < 1:1691292/150‑1 (MQ=255) acgTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCCAGGTCAGGtgggtggg < 2:1503501/150‑1 (MQ=255) | TTATTTATCAATAGATTACGTAAATTTACGGAGAAGCCGTATTTATTGTGTGGAATGATATCGTTACAGGTGCCTCTGAGAGGAAAAGGGTTTGAGCATCAAACCCTTGTGCACCGACGGCGAGGAGGCTGTGTATCGTTTTCGCTACGACGTAGCGAAAACGATACATGTGGTGCCTGGACTG‑GCGAGGTGCCAATGGCCTTCGGTCATCTCACTTTCAGCAGATGATCCAGCGAAAACGCGCCGGCGCCTCGGGCAACCAGGAGCAGCAAGAGCCCTGCCCAGGTCAGGTGGGTGGG > NC_002947/1130049‑1130347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |